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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013650
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.577s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0068209.1
n.a. PREDICTED: ATP-citrate synthase alpha chain protein 1-like [Glycine max] gi|356501618|ref|XP_003519621.1| chr0 24410310 24414397 -
2 domain predictions
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Lj1g3v4804050.1
n.a. PREDICTED: ATP-citrate synthase alpha chain protein 2-like [Glycine max] gi|356505743|ref|XP_003521649.1| chr1 57834981 57841596 +
2 domain predictions
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Lj2g3v1415070.1
n.a. PREDICTED: ATP-citrate synthase alpha chain protein 1-like [Glycine max] gi|356501618|ref|XP_003519621.1| chr2 22264994 22268908 +
2 domain predictions
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Lj3g3v0937850.1
n.a. PREDICTED: ATP-citrate synthase alpha chain protein 1-like [Glycine max] gi|356525708|ref|XP_003531465.1| chr3 11297494 11301516 -
2 domain predictions
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Lj5g3v1118370.1
n.a. succinyl-CoA ligase beta subunit [Caragana jubata] gi|146215968|gb|ABQ10186.1| chr5 17844201 17848743 -
2 domain predictions
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LotjaGi1g1v0750300.1
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G09430.1 ATP-citrate lyase A-3; Swiss-Prot: sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|I1JR24|I1JR24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750300 LjG1.1_chr1 132262354 132267968 +
2 domain predictions
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LotjaGi1g1v0750300.2
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G09430.1 ATP-citrate lyase A-3; Swiss-Prot: sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|I1JR24|I1JR24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750300 LjG1.1_chr1 132262763 132266841 +
2 domain predictions
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LotjaGi2g1v0322000.1
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G10670.1 ATP-citrate lyase A-1; Swiss-Prot: sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1; TrEMBL-Plants: tr|I1JC43|I1JC43_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0322000 LjG1.1_chr2 79670286 79674532 +
2 domain predictions
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LotjaGi2g1v0322000.2
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G60810.1 ATP-citrate lyase A-2; Swiss-Prot: sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|G7K076|G7K076_MEDTR ATP-citrate synthase alpha chain protein; Found in the gene: LotjaGi2g1v0322000 LjG1.1_chr2 79671006 79674243 +
2 domain predictions
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LotjaGi3g1v0130800.1
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G60810.1 ATP-citrate lyase A-2; Swiss-Prot: sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|A0A151RQ09|A0A151RQ09_CAJCA ATP-citrate synthase; Found in the gene: LotjaGi3g1v0130800 LjG1.1_chr3 16334632 16338858 -
2 domain predictions
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LotjaGi3g1v0130800.3
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G60810.1 ATP-citrate lyase A-2; Swiss-Prot: sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|A0A151RQ09|A0A151RQ09_CAJCA ATP-citrate synthase; Found in the gene: LotjaGi3g1v0130800 LjG1.1_chr3 16334924 16338480 -
2 domain predictions
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LotjaGi3g1v0130800.4
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G60810.1 ATP-citrate lyase A-2; Swiss-Prot: sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|A0A151RQ09|A0A151RQ09_CAJCA ATP-citrate synthase; Found in the gene: LotjaGi3g1v0130800 LjG1.1_chr3 16334924 16338480 -
2 domain predictions
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LotjaGi3g1v0130800.5
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G60810.1 ATP-citrate lyase A-2; Swiss-Prot: sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|K7L723|K7L723_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0130800 LjG1.1_chr3 16334924 16338480 -
2 domain predictions
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LotjaGi5g1v0154600.1
n.a. Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT2G20420.1 ATP citrate lyase (ACL) family protein; Swiss-Prot: sp|O82662|SUCB_ARATH Succinate--CoA ligase [ADP]-forming] subunit beta, mitochondrial; TrEMBL-Plants: tr|A5HIG2|A5HIG2_9FABA Succinate-CoA ligase subunit beta; Found in the gene: LotjaGi5g1v0154600 LjG1.1_chr5 40153201 40158211 +
2 domain predictions
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