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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0130800 |
| Transcript ID | LotjaGi3g1v0130800.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G60810.1 ATP-citrate lyase A-2; Swiss-Prot: sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|A0A151RQ09|A0A151RQ09_CAJCA ATP-citrate synthase; Found in the gene: LotjaGi3g1v0130800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:16334632..16338858) extracted from Lotus japonicus Gifu genome v1.2.
CTCGTTTTTCATTTTTGTTCTTTCTGCAAATCTCTGTATATATGGAGTCACCACCAACACACTCACGTTACCCCTCCTTC ACCATTGGATCTACCAATCTCTCACCTTCTTCTTCACTGACCCATTTCCCTCTCTCTAAGGGTAACTGCATTCCTCTTTC TTCAAAATCTTGTCCATTTTTCATGTTCATTTTCCTGTGTAGTTCTGTTACATGTGATTGTGATCATTGAGCTGAGTCTG TAAAAATTTGATTTTGATTGGAATTCTGAGGACCCTTTTAGCTGAATTGATCAGGGTTTTTCTTGTTTTTTCACATTGTG TTGTAGGGGAGGTTTTTGTTTTTTCACTTTGGTGAGTAAACTGTGTATTTAAGAACCAATGGCGCGTAAGAAGATCAGAG AGTATGATTCTAAGAGGCTGTTGAAGGAGCACTTTAAGAGACTTTCTGGCCAGGAATTGCCCATCAAGTCTGCACAAGTA TGCATTCTCAATTTCTCATCATGGTTTATTGTTTAGTTTGTTGAATTTTTTAATTGTTCTTGTGTTGGCTTGGCTTTGAA TCTTGTACCTTCAGATTTGTTTGGTTTGTGAAATTGCAATTTAAAGTTTTGTTAGCTTCTGTTAATTATATGACCCTATA TTTATATTAATCCTATGTGATATCTCAAAGGACATTTGAGTTTTGTAATGATAGAAATTAGAACGTAGATCCGGTGGATG AACATTGAACTAGTCTTGTTTGTCCTTCTGTGACCTCATTTCATTGCATTAGTCAGTTAAAAAAAATTCAAATCTTGAAG CTTCCTTTATTTAACTAACTTACTACAAACAATGTATAAACAATGTATTGCGTTTAGTTTCTTTCCTTGGTTAAGTACAT GGTATGATGGTTATCTCATGATGTTCACATTATCCAAACTTGTTATTTCCTAATCCTTACTGCCATCAGACAGTTACCCC TGCTGTTTAACTATGCTGGTTTGTAGAATAATGTATTAGCTTCTGGATCCCATTAGTATATAGCTGGGCTTTGTGATTAA GTTCAAATTTGCATATTAATAAGCTACCCCCAACTTACAAATTCAATCTGTACAGCTTGCATCTTGAATAATAAAGTTGT GTGATGATTTATTTTGTAGGTCACAGAATCAACCGATTTTAATGAGCTAGCAGGGAAGGAACCCTGGCTCTCATCTTCAA AATTGGTTGTGAAACCTGACATGCTATTTGGAAAGCGTGGAAAAAGTGGGTTGGTTGCCTTGAATCTTGATTTGGCAGAT GTTGCTTCTTTTGTGAAAGAGCGTCTTGGCAAAGAGGTATTTTCTTTCTCCTCTGTCCCTCCAAACTTTACTCAAATTGT GAACACTTTTTCTTAGTACTTTATGTCTATCCTTTAAGGTTTGCTCATATTTCTCTCTAAAATTTAGGTTGAGATGGGTG GATGCAAAGGGCCTATAACAACTTTCATTGTTGAACAATTCATCCCCCACAACGAGGAGTTTTACCTTAACATTGTCTCG GAGAGACTGGGGAACAGTATAAGCTTTTCTGAATGTGGAGGAATTGATATTGAAGAGAACTGGGACAAGGTACCAAATTG CATATTGTTTTTACCTTTTAAAAAATAAATCTCACTGTAATTTTTACTCATATCTTCCCTCATAGTTTCCTGAGCTACAA AATGGTCTGTTCGTATTTCAGGTTAAGACTGTATTTATTCCAACAGGAGTGTCTCTTACATTAGAGAATATTGCCCCTCT TGTTGCAACCCTCCCATTGGAGGTATATTCACTTGACTAACTTGTTTTTACATGAACAGGTCAACTTAGTTACTTTTTTT TTTTACCTAACATGTATTTCAGCTTTCTACATTTTATTGATGTTAATGAATACCTAATACTATTTTGTTTGTGGCACTTT ATTTCAATTATTTACAGATCAAGGGAGAAATTGAGGAATTTCTCAAAGTGATTTTCGCTCTATTTGAAGGTATACTATAT AATATAACAAAAGATCATGTGTGCTTTTGAAGACAACTTCATTGACAGATTCCCTTAAATTTAAATATTTTATTTCTATT ACCTCCTTGTATGTTAGATCTGGATTTCACTTTCTTGGAGATGAATCCTTTCACTTTGGTTAATGGAAAGCCGTATCCTT TAGATATGAGAGGGGAGCTAGATGACACTGCTGCTTTCAAGAATTTTAAGAAGTGGGTTTCTTCCATCCAAAGAGTATTA ACTTTTATAAGGATGCATATAATTGTTAATATCTCTAACTAATCAAGAAAAACTGAATCATATTTCACAGTTCACATTTT TTATTGAGTATGCGTGTTGTTATTATTTTCAGATGGGGAAACATTGAATTTCCATTGCCATTTGGAAGGGTTATGAGTCC TACCGAGACTTTCATTCATGGATTAGATGAAAAGGTGAACAAATATAATTTTCAGCTTTATCTACAATTGCATTCAATTC ATTTATAACTTTGTCCTTAAGCTGCAAATCTCAATCATCTTTGCTTCTATGTAATACTAAGATATGGTCTGCAGATTGTC AGGGTCAATTAAATTCCTTGTACCAACCTCTTATCCATCATGAATAATATCATTTCTTCTAGTTATGGTTGTATGAAAGT TCTATGAAAAGCTTATGATGTTTGTTTGGATGTTTTCTGCTGCCAGACAAGTGCATCTTTGAAATTCACAGTATTAAACC CAGAGGGCCGGATTTGGACAATGGTAGCTGGGGGAGGCGCTAGCGTCATCTATGCTGACACAGTGTGTTTCTATTACTTC AGAACTAAATACATTGCTAAACTATATTCTCTCTTGATATTAAGCAACAAATACTAATTTATTAAAACAGGTAGGAGATC TTGGCTATGCTGCTGAGCTTGGAAATTATGCAGAATATAGTGGTGCACCCAAGGAAGATGAGGTCTTGCAGTATGCCAGA GTTGTCATTGATGTAATTAATTCATCTCACTACATTGTTTTCAGTATAATCATTTCCGATTTGCAGATTCAATATTGTTC CTTTAACATGATGAGCCATTCTTTCTTTGGAGTGTGTAAGGGTACTTGAAACTGATACTGTAGTGATTTTAGTTACATGT CCATGATAATCTCTTTGCAGTGTGCAACTGCAAATCCTGATGGCCAAAAGCGAGCACTTGTGATAGGGGGAGGAATAGCT AACTTCACCGACGTTGCTGCTACATTCAGTGGCATAATTCGAGCTTTGAAGGAGAAGGTAAGCCTTATCACAATGAAGCT ATGCTCAGTTATATCAAACGATGATTTGCTTGTAGCAGAGTTAATAAATTATTGAGCTTTATTACAAACCAGGAACAAAA GCTAAAAGAAGCAAAGATGCACCTCTATGTCAGGAGAGGAGGTCCCAACTACCAGAAGGGCCTAGCGAAAATGCGGGCAC TTGGAGAGGAGATTGGCATCCCTATTGAGGTGGTACAACTGATACCTTTATTGATTGTGTTGAGAAGTCCACGTTGACTA AAGATATAACTAAATAATTCATTAAAAAGAGTTATGCAACCCTCACCCTTAAACTAGTTTTTGGGGTAGAGTTAGTCATA ACTCATAACCTAATTCTAATATGGTATCAGAGCTTATCATCGACCCATTTCTTGGGCCACCCGCTAATGGGCTACCCGCA TATGTCCAGTCCAGCCCTAGGGGTCATGTGTGTTGAGAAGTCTCACATTGACCAGAGATATGATTCAATAATTCCTTATA AAGACCTTACCCAAATTCTAATAGGTTGTTTTAAAACCAACTTATTGTGTTCATCAAGTTTGTTTTGAGGAACTTCCTCT TATCTAATATGGTCTCTTTCCAGGTTTATGGACCCGAAGCAACAATGACTGGTATATGCAAACAAGCAATCCAGTGCATC ACTGCTGCTGCTTAAATATCCATTCTTAGGCGAGTTATTTCATTTTCATTTGTAGTTTCAAGTGATTGTTGATTCTCAAT TCTCTTTCCTATTCTCAGAACTGTGAAATTAGGTGAGTTAGAGCATATGTTGTTACTATTTTAGTCATCTAATAAAGTGA TCAAGGGTGTTTTGTATCATGTATAATTCTGATCGTGCAGTCTTGACTCTTGACACAATGAAGTGATATGTGTAACTTGT TTAAGTTTTTCGATGCTACAATTTTTCTTACTGAAATAAATGGATTTTGTTATCGATTAATTTTACA
CDS sequence (LotjaGi3g1v0130800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCGTAAGAAGATCAGAGAGTATGATTCTAAGAGGCTGTTGAAGGAGCACTTTAAGAGACTTTCTGGCCAGGAATT GCCCATCAAGTCTGCACAAGTCACAGAATCAACCGATTTTAATGAGCTAGCAGGGAAGGAACCCTGGCTCTCATCTTCAA AATTGGTTGTGAAACCTGACATGCTATTTGGAAAGCGTGGAAAAAGTGGGTTGGTTGCCTTGAATCTTGATTTGGCAGAT GTTGCTTCTTTTGTGAAAGAGCGTCTTGGCAAAGAGGTTGAGATGGGTGGATGCAAAGGGCCTATAACAACTTTCATTGT TGAACAATTCATCCCCCACAACGAGGAGTTTTACCTTAACATTGTCTCGGAGAGACTGGGGAACAGTATAAGCTTTTCTG AATGTGGAGGAATTGATATTGAAGAGAACTGGGACAAGGTTAAGACTGTATTTATTCCAACAGGAGTGTCTCTTACATTA GAGAATATTGCCCCTCTTGTTGCAACCCTCCCATTGGAGATCAAGGGAGAAATTGAGGAATTTCTCAAAGTGATTTTCGC TCTATTTGAAGATCTGGATTTCACTTTCTTGGAGATGAATCCTTTCACTTTGGTTAATGGAAAGCCGTATCCTTTAGATA TGAGAGGGGAGCTAGATGACACTGCTGCTTTCAAGAATTTTAAGAAATGGGGAAACATTGAATTTCCATTGCCATTTGGA AGGGTTATGAGTCCTACCGAGACTTTCATTCATGGATTAGATGAAAAGACAAGTGCATCTTTGAAATTCACAGTATTAAA CCCAGAGGGCCGGATTTGGACAATGGTAGCTGGGGGAGGCGCTAGCGTCATCTATGCTGACACAGTAGGAGATCTTGGCT ATGCTGCTGAGCTTGGAAATTATGCAGAATATAGTGGTGCACCCAAGGAAGATGAGGTCTTGCAGTATGCCAGAGTTGTC ATTGATTGTGCAACTGCAAATCCTGATGGCCAAAAGCGAGCACTTGTGATAGGGGGAGGAATAGCTAACTTCACCGACGT TGCTGCTACATTCAGTGGCATAATTCGAGCTTTGAAGGAGAAGGAACAAAAGCTAAAAGAAGCAAAGATGCACCTCTATG TCAGGAGAGGAGGTCCCAACTACCAGAAGGGCCTAGCGAAAATGCGGGCACTTGGAGAGGAGATTGGCATCCCTATTGAG GTTTATGGACCCGAAGCAACAATGACTGGTATATGCAAACAAGCAATCCAGTGCATCACTGCTGCTGCTTAA
Protein sequence (LotjaGi3g1v0130800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARKKIREYDSKRLLKEHFKRLSGQELPIKSAQVTESTDFNELAGKEPWLSSSKLVVKPDMLFGKRGKSGLVALNLDLAD VASFVKERLGKEVEMGGCKGPITTFIVEQFIPHNEEFYLNIVSERLGNSISFSECGGIDIEENWDKVKTVFIPTGVSLTL ENIAPLVATLPLEIKGEIEEFLKVIFALFEDLDFTFLEMNPFTLVNGKPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFG RVMSPTETFIHGLDEKTSASLKFTVLNPEGRIWTMVAGGGASVIYADTVGDLGYAAELGNYAEYSGAPKEDEVLQYARVV IDCATANPDGQKRALVIGGGIANFTDVAATFSGIIRALKEKEQKLKEAKMHLYVRRGGPNYQKGLAKMRALGEEIGIPIE VYGPEATMTGICKQAIQCITAAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 423 | 423 | 6.0E-289 | – | |
| PANTHER | 1 | 423 | 423 | 6.0E-289 | – | |
| SUPERFAMILY | 4 | 236 | 233 | 3.24E-38 | – | |
| Gene3D | 5 | 239 | 235 | 2.3E-82 | – | |
| Pfam | 6 | 203 | 198 | 1.5E-16 | ||
| Gene3D | 31 | 110 | 80 | 2.3E-82 | ||
| Pfam | 241 | 417 | 177 | 1.7E-81 | ||
| Gene3D | 244 | 404 | 161 | 3.0E-66 | ||
| SUPERFAMILY | 257 | 403 | 147 | 1.59E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi3g1v0130800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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