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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0750300 |
| Transcript ID | LotjaGi1g1v0750300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Succinate--CoA ligase [ADP]-forming] subunit beta; TAIR: AT1G09430.1 ATP-citrate lyase A-3; Swiss-Prot: sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2; TrEMBL-Plants: tr|I1JR24|I1JR24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132262763..132266841) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGAGGAAGAAGATCAGAGAGTACCACTCCAAGAAGCTCCTCAAAGAGCACCTCAAACGCCTCGCCTCCATCGACCT TGACATCAAATCCGCTCAGGTTCGCTTCCAATTCAATCAAATTTCTCTTCTCATGCTGCTCTGTTTTCTAAATTCAATGA AATTCATCATCACCAATTCAATTCCTTCATAGGTCACTGAATCAACGGATTTTGCTGAGTTGACTAACCAGCATCCATGG CTTTCATCCACCAAACTGGTTGTCAAGCCAGACATGCTGTTCGGGAAGCGTGGGAAAAGTGGCTTAGTAGCTCTCAATTT AGATGTTGCCCAAGTTGCTGAATTTGTCAAAGAACGCCTTGGCGTTGAGGTAACTGCTAAAAAACACAACAATTAGTATA AAATTGGAGTATCGGTTTTCATTTCATGTTCCTGAACACTGTCTCTGTATTGGGTATTCCTCAGGTTGAGATGGGTGGTT GCAAAGCACCTATAACTACGTTTATTGTTGAGCCCTTTGTTCCTCATGAGCTAGAGTTTTATCTGTCTGTTGTTTCTGAA AGGTTGGGCTCTACCATCAGCTTCTCAGAATGTGGGGGCATAGAAATTGAAGAGAACTGGGATAAGGTAATAATACTGAA CTAATTATATGTGGTTAGATTGTGTTGCTGATCATTATGTGTTGCCATGTGTAAATGTAACCCTGATTGATAAGCTAACA TATATGATTGCTATCACTTATAGGTTAAAACTATATTCCTTCCAACAGAGAAACCTATGACTTTGGAGGCATGTGCGCCC TTGATTGCTACTCTTCCCTTGGAGGTCAGTATTTTCACACTTCTCTGGTGTTTGCCTCACTTTCTTGTTTCTTTGTAGTG GGAAAGTGTGTCTTGTTGATCATTCAAGGAATTAATAATTTCCATGTTAGAACTCGAGAATTGCTCGGACACTGATATGT CCGACAATGTGAATAATTTAGATTTAGATTGTGCATATCTTGAGCAGGTTATTGCATATCTTAAAAAATACTTTATGTAG ACGCATGATCTGAGTGTTATTAATGCCTTCTGGTCCTAAACATTTCCTATCTCTGTTTACACTTCTGAAATCTTTGGCTT CTGCATTTTTACGATGATGCACTCCAGTTCATTTTTCCCCCTCTATGTTAGCTCTTCAAGCATAATCTGGACTTGGTCTG CACTTTTTAAGGATTTTGATGCACTCTCTATGTAGCAAATGCTTATTCTTCCTTTAATTCCCAGGTTCGGGGGAAAATTG GCGATTTCATAATGGGTGTGTTTGCTGTCTTTCAAGGTATGATGTTAACAAATTTGAAACACTAGTGTATCCTCTCACTG TTTTGGAGCCTGAAACACAGCATTGGTCTTTGTTTTCCTACATAGTATAATCTATGAGAACAAATACTAAATTGGTCTTT GTTTTCTCCTACCTACTATAGTCTATGAGAACAAATACTAAGTAGTCCATTTTATGCAAGTCAGGGTTCCTTTTCACATT ACTTTACTCATTAGTAATGCCAACTATCACAGCTTTTATTCTGTACAAAATTGTTAGGTCTGACGTTTTTGTTCTCGCAT TCTGTCCCTAGATCTGGACTTCAGTTTTCTAGAGATGAATCCATTTACACTAGTGGATGAGAAGCCATATCCACTGGACA TGAGAGGGGAATTGGATGACACGGCTGCATTCAAAAACTTCAACAAGTATAATCCTTCGATATTGATGTTTCATAGTGTT TTTAATTTTGAAGTGAAGGAAATTTATCTATTACTGCACACAACTAGATGTTATCCAATCTATATATTGTTATGCATTCA GGTGGGGTGATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTAAGCCCTACAGAAAGCTTCATTCATTCCTTGGATGAC AAGGTATTTTATTTGTATCTGTGTGGTCATTATCTTATTAATGCATGCAATTTCTTTCTGAGCATGCCTTGAGGGAAGAA TTGTTTTTTATTCTTTAAGCTACTGCATCTAGAATTGTTTTTTAGCCAACAAGGCTCTCTTTGCAGACACTTCTTTCGAA AGATGCATGCTAGAGAACAGCCTCTCCATGATCTCACTTGAAGAATTTAGGCCTAAATCAAAGAAATTCAGGGCCTGGGT ATATCAATGCACAAAAAGTGCAAAGCCTTTTTTTTAGTTTGAGTGCCTAGTCTCTCTAAAGTCCAAGCCAAATCCCAGAC TACCTTTACCAATCACACTCCCTCAGAATATAATCTCCCCCTCCAACTGACCCACATGAGTCCGTCCACTCACTCACTAT GCGGTTAGTTATTCTTTTCTTTCTCCTAGGCTTTATCAAGTGCGTTAGTGCATTACACCTCTTTCTTCTACACCTTAGTA ATTGTTGGCTTTGGGTCGCATCATCTCTCCACCCTTCAAAAACACACCTTGTCCCCCCAGTTGGAAATCAGGGAAATGTT TTCAAACAATGCTTCCCGAGGTTTTTCACAAATAGACTAGTGTTTCCATTTGGTCAAAACATCCACAGTCCCCTGAGCAT AAATACATCAAGTACTCAACAGTCAAGTTTGTCTTGACAGTTTATTTTTCATAGGCTTTACTTGCACTTGTTATGCTAAT GATGATCTTGGAGCACCTTCTCAACTATGCACAGCATAGGGCACTTTTGCACAGTGAGAACTAGGAAATCCTTTAAAAAT TGAAAAAAGTTATCAGAATTTTAAGTATTTTCAGTCATTCTTATGGAATTCCGTACATAGTTTTGCTGACCTCATATGAT AAATATTGCCTAAATAAGTGGTAGCCTGGATAGTTAGTATTGACTATTGAGCACTAAAATACGTGACCTTTATAACTTGC ACCTTTCAGTGCTATTGTTGTTGCAATGCCTTGTTTTTGTAAAAGTAATTCTTCCCTGTTTAATAATTAAATGTAACTTT CGTCTTTTATAGGTTGGTAAAATATATGCTTTTTCATATTGCAGACAAGTGCATCTTTGAAATTTACTGTATTGAATCCA AAAGGACGCATCTGGACAATGGTGGCTGGAGGTGGTGCAAGTGTAATTTATGCTGATACTGTAAGTTGATTTTTTATGGG TTTATTTCAAGCGGAAAATGTGAACAAAGGGCCACCTCAAACAGTGATTACTGGGAGGTTTGCTTTTAGTAGGTATTTTT GGTGGCTTATCTACCTTTATTTTCTAGGTTGGAGATTTAGGCTATGCATCCGAGCTTGGCAACTATGCTGAGTATAGTGG AGCTCCAAATGAGGAGGAAGTGTTGCAGTATGCAAGAGTCGTAATAGATGTAAAGATTCTAACCACTCTTTTTCTGTTTC CTTATGACTTAAATTTCACTATATGATCATCGCTAGTGGCCTCCATCACTACGTCACTTGAAAATTTGTGCTCTTGACTG TGTTGCAGTGTGCTACTGCAGATCCTGATGGCCGTAAAAGAGCCCTTCTTATTGGAGGTGGCATCGCAAACTTCACTGAT GTTGCTGCCACATTCAGTGGGATTATTCGAGCCCTGAAAGAGAAGGTATGATATTGCTATTTATGTCCTTATTCCACTTG CAGTTGTTGATTTGATAGTTAATGAACTTGTTTCCAACCGCTCTACAGGAATCAAAGCTTAAAGCAGCAAGAATGCACAT CTTTGTCAGAAGAGGTGGTCCAAATTATCAGACTGGTTTGGCAAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAA TTGAGGTAAGGGTGGCAATCATTTTATGAATCTTGTAATTGAAGAGTTCTTAACCAGTTAACTTTGAGGTTTTGGCATTA AGCCTCAAAGATTTTAAAGGAGAAGTGGTGGAGTGCCTACATTGGAGTCTTGAGTAAAGTGTTCTCGAGTCTCTACCACT GTGAAAAAACAAAAACATTGATATGATAAATGCAGATTTTCTTTGTGTCTATTGTTTGTATAATTGTGGCAAATCTTGTG GTTCCAGGTTTATGGGCCGGAGGCCACAATGACTGGCATCTGCAAGCAAGCTATTGATTGCATCATGTCTGAAGCATAG
CDS sequence (LotjaGi1g1v0750300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTTCGGGAAGCGTGGGAAAAGTGGCTTAGTAGCTCTCAATTTAGATGTTGCCCAAGTTGCTGAATTTGTCAAAGA ACGCCTTGGCGTTGAGGTTGAGATGGGTGGTTGCAAAGCACCTATAACTACGTTTATTGTTGAGCCCTTTGTTCCTCATG AGCTAGAGTTTTATCTGTCTGTTGTTTCTGAAAGGTTGGGCTCTACCATCAGCTTCTCAGAATGTGGGGGCATAGAAATT GAAGAGAACTGGGATAAGGTTAAAACTATATTCCTTCCAACAGAGAAACCTATGACTTTGGAGGCATGTGCGCCCTTGAT TGCTACTCTTCCCTTGGAGGTTCGGGGGAAAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTTCAAGATCTGGACT TCAGTTTTCTAGAGATGAATCCATTTACACTAGTGGATGAGAAGCCATATCCACTGGACATGAGAGGGGAATTGGATGAC ACGGCTGCATTCAAAAACTTCAACAAGTGGGGTGATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTAAGCCCTACAGA AAGCTTCATTCATTCCTTGGATGACAAGACAAGTGCATCTTTGAAATTTACTGTATTGAATCCAAAAGGACGCATCTGGA CAATGGTGGCTGGAGGTGGTGCAAGTGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCCGAGCTTGGCAAC TATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAAGTGTTGCAGTATGCAAGAGTCGTAATAGATTGTGCTACTGCAGA TCCTGATGGCCGTAAAAGAGCCCTTCTTATTGGAGGTGGCATCGCAAACTTCACTGATGTTGCTGCCACATTCAGTGGGA TTATTCGAGCCCTGAAAGAGAAGGAATCAAAGCTTAAAGCAGCAAGAATGCACATCTTTGTCAGAAGAGGTGGTCCAAAT TATCAGACTGGTTTGGCAAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAATTGAGGTTTATGGGCCGGAGGCCAC AATGACTGGCATCTGCAAGCAAGCTATTGATTGCATCATGTCTGAAGCATAG
Protein sequence (LotjaGi1g1v0750300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFGKRGKSGLVALNLDVAQVAEFVKERLGVEVEMGGCKAPITTFIVEPFVPHELEFYLSVVSERLGSTISFSECGGIEI EENWDKVKTIFLPTEKPMTLEACAPLIATLPLEVRGKIGDFIMGVFAVFQDLDFSFLEMNPFTLVDEKPYPLDMRGELDD TAAFKNFNKWGDIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIFVRRGGPN YQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIMSEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 363 | 363 | 1.2E-238 | – | |
| PANTHER | 1 | 363 | 363 | 1.2E-238 | – | |
| Gene3D | 1 | 50 | 50 | 5.8E-60 | ||
| SUPERFAMILY | 2 | 176 | 175 | 3.65E-30 | – | |
| Pfam | 2 | 143 | 142 | 5.9E-11 | ||
| Gene3D | 51 | 179 | 129 | 5.8E-60 | – | |
| Pfam | 181 | 357 | 177 | 1.9E-81 | ||
| Gene3D | 184 | 344 | 161 | 3.7E-66 | ||
| SUPERFAMILY | 199 | 343 | 145 | 2.04E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0750300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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