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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013935
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.618s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4752570.1
n.a. PREDICTED: trafficking protein particle complex subunit 8-like [Glycine max] gi|356503854|ref|XP_003520717.1| chr1 56753220 56766869 +
2 domain predictions
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Lj1g3v4752570.2
n.a. PREDICTED: trafficking protein particle complex subunit 8-like [Glycine max] gi|356503854|ref|XP_003520717.1| chr1 56756638 56766869 +
2 domain predictions
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Lj2g3v2925180.1
n.a. PREDICTED: trafficking protein particle complex subunit 9-like [Glycine max] gi|356563912|ref|XP_003550201.1| chr2 38158419 38161735 +
3 domain predictions
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Lj5g3v0528880.1
n.a. PREDICTED: trafficking protein particle complex subunit 9-like [Glycine max] gi|356563912|ref|XP_003550201.1| chr5 5779859 5794841 +
3 domain predictions
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Lj5g3v0528880.2
n.a. PREDICTED: trafficking protein particle complex subunit 9-like [Glycine max] gi|356563912|ref|XP_003550201.1| chr5 5779859 5794841 +
3 domain predictions
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LotjaGi1g1v0737800.1
n.a. Trafficking protein particle complex subunit 8; TAIR: AT5G16280.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9Y2L5|TPPC8_HUMAN Trafficking protein particle complex subunit 8; TrEMBL-Plants: tr|I1JQ96|I1JQ96_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0737800 LjG1.1_chr1 131222437 131237425 +
2 domain predictions
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LotjaGi1g1v0737800.2
n.a. Trafficking protein particle complex subunit 8; TAIR: AT5G16280.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9Y2L5|TPPC8_HUMAN Trafficking protein particle complex subunit 8; TrEMBL-Plants: tr|I1JQ96|I1JQ96_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0737800 LjG1.1_chr1 131222683 131236545 +
2 domain predictions
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LotjaGi5g1v0057100.1
n.a. Trafficking protein particle complex subunit 9; TAIR: AT5G11040.1 TRS120; Swiss-Prot: sp|Q9FY61|TR120_ARATH Trafficking protein particle complex II-specific subunit 120 homolog; TrEMBL-Plants: tr|I1MWX3|I1MWX3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0057100 LjG1.1_chr5 9661302 9678111 +
3 domain predictions
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LotjaGi5g1v0057100.2
n.a. Trafficking protein particle complex subunit 9; TAIR: AT5G11040.1 TRS120; Swiss-Prot: sp|Q9FY61|TR120_ARATH Trafficking protein particle complex II-specific subunit 120 homolog; TrEMBL-Plants: tr|I1MWX3|I1MWX3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0057100 LjG1.1_chr5 9661510 9675950 +
3 domain predictions
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