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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014645
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.980s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0130080.1
n.a. PREDICTED: TOM1-like protein 2-like [Cicer arietinum] gi|502159182|ref|XP_004511421.1| chr1 1661723 1664782 -
2 domain predictions
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Lj1g3v0265400.1
n.a. PREDICTED: TOM1-like protein 2-like [Glycine max] gi|356509355|ref|XP_003523415.1| chr1 2899641 2908255 +
2 domain predictions
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Lj3g3v3639590.1
n.a. PREDICTED: TOM1-like protein 2 [Vitis vinifera] gi|225461774|ref|XP_002285602.1| chr3 44170389 44173965 +
2 domain predictions
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LotjaGi1g1v0165000.1
n.a. TOM1-like protein 2; TAIR: AT1G21380.1 Target of Myb protein 1; Swiss-Prot: sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2; TrEMBL-Plants: tr|A0A0S3RDF2|A0A0S3RDF2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0165000 LjG1.1_chr1 31088439 31098167 -
2 domain predictions
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LotjaGi1g1v0270600.1
n.a. TOM1-like protein 2; TAIR: AT1G21380.1 Target of Myb protein 1; Swiss-Prot: sp|Q68FJ8|TM1L2_XENLA TOM1-like protein 2; TrEMBL-Plants: tr|A0A0L9UFL9|A0A0L9UFL9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0270600 LjG1.1_chr1 66010226 66018938 -
2 domain predictions
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LotjaGi2g1v0450500.1
n.a. TOM1-like protein 2; TAIR: AT5G16880.1 Target of Myb protein 1; Swiss-Prot: sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2; TrEMBL-Plants: tr|A0A151SD01|A0A151SD01_CAJCA TOM1-like protein 2; Found in the gene: LotjaGi2g1v0450500 LjG1.1_chr2 94382532 94386661 -
2 domain predictions
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LotjaGi3g1v0542400.1
n.a. TOM1-like protein 2; TAIR: AT5G16880.1 Target of Myb protein 1; Swiss-Prot: sp|Q5SRX1|TM1L2_MOUSE TOM1-like protein 2; TrEMBL-Plants: tr|A0A0L9TAI5|A0A0L9TAI5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0542400 LjG1.1_chr3 95882073 95886307 +
2 domain predictions
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