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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014892
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.402s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1966200.1
n.a. PREDICTED: replication factor A protein 2-like [Glycine max] gi|356552567|ref|XP_003544637.1| chr1 23247572 23252001 -
2 domain predictions
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Lj4g3v2119290.1
n.a. PREDICTED: replication protein A 32 kDa subunit B-like isoform X2 [Cicer arietinum] gi|502150250|ref|XP_004507862.1| chr4 28926602 28930092 +
2 domain predictions
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Lj5g3v0586520.1
n.a. PREDICTED: replication protein A 32 kDa subunit A-like [Cicer arietinum] gi|502124582|ref|XP_004498588.1| chr5 6826472 6830204 -
2 domain predictions
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LotjaGi1g1v0393200.1
n.a. Replication protein A 32 kDa subunit-like protein; TAIR: AT2G24490.1 replicon protein A2; Swiss-Prot: sp|Q9ZQ19|RFA2A_ARATH Replication protein A 32 kDa subunit A; TrEMBL-Plants: tr|I3SHT3|I3SHT3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0393200 LjG1.1_chr1 87774747 87780576 -
2 domain predictions
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LotjaGi4g1v0301800.1
n.a. Replication protein A subunit; TAIR: AT3G02920.1 Replication protein A, subunit RPA32; Swiss-Prot: sp|Q8LFJ8|RFA2B_ARATH Replication protein A 32 kDa subunit B; TrEMBL-Plants: tr|A0A151SRU2|A0A151SRU2_CAJCA Replication factor A protein 2; Found in the gene: LotjaGi4g1v0301800 LjG1.1_chr4 67675579 67679830 +
2 domain predictions
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LotjaGi5g1v0065200.1
n.a. Replication protein A 32 kDa subunit-like protein; TAIR: AT2G24490.1 replicon protein A2; Swiss-Prot: sp|Q9ZQ19|RFA2A_ARATH Replication protein A 32 kDa subunit A; TrEMBL-Plants: tr|A0A0L9V123|A0A0L9V123_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0065200 LjG1.1_chr5 10895351 10899409 -
2 domain predictions
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