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LotjaGi3g1v0053400.2

Overview

Field Value
Gene ID LotjaGi3g1v0053400
Transcript ID LotjaGi3g1v0053400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TAIR: AT3G08590.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Swiss-Prot: sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TrEMBL-Plants: tr|A0A1J7H4F6|A0A1J7H4F6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0053400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:5561215..5566066) extracted from Lotus japonicus Gifu genome v1.2.

AAAACAAGGAAGATGGGAAGCCAGTGGAAGTTGAATGATCACCCTAAGCTTCCAAAGGGGAAGCAGATTGCCATGGTGGT TTTGGATGGTTGGGGTGAGGCCAAACCTAATGAGTACAACTGCATCCACACTGCCGAGACACCTACTATGGATTCTCTCA AAAACGTACCCATCTTTTTTGGATTTGAATGGATCTGCTGTTTTGATTGGTCGTTGTTAGATTTGATGGATCTTTTGTTG TACAGGGTGCACCTGAGAGGTGGAGATTGGTTAAGGCTCATGGGAAAGCTGTGGGGCTTCCTACTGATGATGATATGGGC AACAGTGAAGTTGGTCACAATGCTCTTGGTGCTGGCCGTATATATGCTCAGGGGTATGTATTGTTAAATTGGTCTTTTTC GGTTTGACTATAATATGGTTATTGATTGCTGATTTATCTTCTAGATTTCATTGCATTAGATTTTGTCCGGTTTTGATGCA ATCAAAGTGCTTCGCAGTTGGTTTTGTTAAAATTGAATCTAATGTATTGGTCTGCGTATGCCATGTAGGTTTGACACAAT TTCATGTTAGTTGTCAACTGATGTTGTCTCTTGTTATTGTTGTTGCTGTAATGGCTTGATCTTTATTGTTTTTTGAATTA TCCAAGAGGTTTGTTATTGGATTCACTGATGTCTAGTGTGGTTTTAATTCTTGGATCCAATGTAATAATCAACACTTCAA CAGTGCCTTTGCTTGTCATACATTGTTTCACTTTTCCTTATCACTTTGTAGTCTTATTTCTGAGTATACAATGTGTTCTG TGTTAGATTTAAGAAATTTCTATACTGGAGGCTAAATCTACCGTTATACTGTGCACGCTAGTTTATCTTGAAATACTTTC CCTGTTTGTACTTTGTTTGGCCTCTTGTTTTTTATTTTTATTTTCTTGTTTTAAATAAATTCCCGGCATGTCTGAGGATT GAGATATCATGGTTTGTGATTTCAGTGCTAAGCTTGTTGACATTGCTCTTGAATCTGGGAGCATTTATGAAGGAGAAGGT TTCAAGTACATAAAGGAATGTTTTGAAACTGGCACATTGCATCTCCTTGGGTTACTAAGTGACGGTGGAGTCCACTCCAG ACTTGACCAGTTGCAGGTGAGCATTTAGGTTTGGAACTTTTGTACCTTCTATGCTTTAAAAATTGGTTAATTTCTAATTA AACGCTTTTGTGCAGTTGCTCCTTAAAGGTGTTAGTGAGCGAGGTGTTAAAAGAATTCGTTGTCATATTCTTACGGATGG CCGTGATGTTTTAGATGGCTCAAGTGTCGCATTTGTTGAAACTCTTGAAGATGATCTAGCGAAATTGCGTGAAAAAGGCA TTGATGCAAGGATAGCATCAGGTGGAGGTCGAATGAATGTCACTATGGACCGTTATGAGGTACTACTTATTTGTCGTCTG CAATTTGTACAAGTCATGCATTTTTCACTGCTCCCATTATGGGATTTTAGTTTGAATTTGGACGCGCTAGTACATCTACA GCCTTTCCACCATCTCTCCTTTTTTTGAAGAAATTGTTTCGAAAAAGAAATAATTTGTGTTCCATTTTTACCTCCTTGTT TGCATATAAGATGGGATGAATGGTTTAATAGAAATTATACAATAATGACAACAGCTTTTTGTACTAGTATTTGTTGTGAT AAAATACCATTTGTTTACAGAAATTGTCTTTGTTGGTAACTTCATAATTTCAATTTTTTTAGATATTAAATTTTATGTGT TTTTACTTGAAAATTGTGTATTGTGTATTTTTTACTGGTATATGTGATGATAAAATTATTCCAAATCTAACTGCAGAATG ACTGGAGCGTTGTTAAACGAGGGTGGGATGCTCAAGTTCTTGGTGAAGCCTCTCATAAGTTTACTAGTGCTCTTGAAGCT GTCAAGACACTGAGGGCAGAACCAAAAGCCAATGACCAGTATCTTCCTCCTTTTGTTATCATTGATGAGAGTGGGAAGCC TGTTGGCCCAATAGTTGATGGAGATGCTGTTGTTACATTGAACTTCCGAGCAGATCGTATGGTTATGATTGCTAAAGCTC TTGAATATGAAAATTTTGACAAATTTGACAGAGTTCGTGTCCCTAAGATTCACTATGCTGGAATGCTTGAATATGATGGT GAATTGAAGCTTCCAAGGCATTACCTTGTTTCTCCACCATTGATTGAAAGAACATCTGGAGAATATTTAGTGAATAATGG TATTCGGATTTTCGCTTGCAGGTATCACTACTTGGATTGTTATGATACACCCATACAAACCCTCAGTCTTCCTAATTGTC ACTCTACTTCTGTCGGTGAATGCCTTGTAACTCCTATATGCATGAAATTTGCTCTATCTGATTGGCAAGCGGAACATAGA AATTGTTTGCCAATCTTCACTAATTATGAATTTGATTTTCCTAGAATATCTTTTATTTCCCAATGCTAGTTCTAAGCAAA TTTCTTATTACTAACTACCCTTGTTGACAAGTTAGCTTTCAAACTAACAACTTTTTTATGTTTCTAAACTCCTTGCTTTC ATGGTATTTTTTGTTTCATCTTATCATAGTCATCTTGTTGCAAGCTAGATCTGGTCAGAATTAGGAAACTAAAAATTCAA TATATATGTCTGAGGAAGAAATGATGTGAATATATGAATTTAACTCAACCTCGATCCTCTAAGCTATTTATAAGATTTTA GCCACATGCATATTATCACCTTCTTATTGTCCACTGTTGTTGTGTAGCCTAAATGGCTTTTAGAGGTAAAGCAAATGAAA AAAAACATACCTTAGAGGAAGGACTGATTCGGATAATTAGAAGCCTGTAAGCATGTCATAAGATTTTCTAAATTTACTAG CCTTTGTAATTTACTATGCAGTGAGTGAAGTGAAAATAGATGGATAGGAGTGTAATGGACCAATAGAAAATAATACCTGA TAAATCTAACTATTATTCTAACTCTTGGAGTTAGGGTTCGTGTGGCAATATCTGTGTTATGTTCTCTTCAAGCGTAGAAC TTTTTTTCTCTTGAATGATAGAAAAATACTTACATGTATGAATTTCTTCTTCAACAGTGAGACTGTTAAATTTGGTCACG TCACATTCTTCTGGAATGGAAACCGCTCTGGGTATTTTAACCCGGCAATGGAGGAATATGTGGAAATTCCTAGTGATAGT GGGATTACATTCAACGTCAAACCAAAGATGAAGGCAGTGGAGATTGCTGAAAAGGCAAGAGATGCAATTCTTAGCAAGAA ATTTGATCAGGTAATTAACTGGGGCATTTGTTGATGTTGAGAATCATGGCTAAGGTCAAATGAACATTCCCTCATCCTTA TTATACTTTATCTGTTGCTTAGGTACGTGTTAACCTCCCAAATAGTGATATGGTGGGGCATACAGGTGACATTGAAGCAA CAGTTGTGGCTTGCAAGGCTGCTGATGAGGCTGTAAAGGTATGAACTTCTATTTCTCAAATATGTTGGAACATTTTTTTG TCATTATTTAGGTTTCTATTTAATAAATTGAAGTATTATAATGGTGGCTGAATACAAGAATAAAGTGCAAGATTTTGAAA CAGCTTAAATTTTTAATTAAGCATGTGTATGCAAGTGGTTTTTGGTTATATATACGGAGCATGTTATGTGAGACCGTGAG GAGTTCTATGGTCAACATTTACTTTCATCTATTGAGCTTCCCATATTTGGATTCCGTGTTGCACCCCGCAATGGGAATAT TGATGAAACCTATAGATGATCCAAGATTCAATATTCCCATTGCATATTCCTTACAATCCAGTGGTGCACCCCCATTGGAC ACTTGTTGGATCTTGGATCATCTCATTTAGACCCTAGAATGTGAAAATATGTGCAGCGAATGTAGGTCCAAGGGTCTTGT TGCCACTTATATAATTAAAATTCACATGGGTCCAAGAGTATTGTTGCCATTTATGTAAATAATTAGTTTGTTTAGGTTTA ACTTTTTTCAATCACTTTTTGTTTGATTTGGCATATTCTAAGAATTAGATTTATAGTAAATTTCTTTTCTTCTCATGGAG GGGAAGAGAACATAAGTCTTTTGAATGCCAAACTATTTGTAAGTCAATAGTTCTTGCATGTAGTTTATGTCCTGTTGCTG ATTACTGTAAGAAAAAGATTTATATTTAAAAGAAAAAGAGAGGTGAAAGCTAGATCGTTACACAATGTATTTATGAATGT TCGTGCAATTGCAGATGATCCTTGATGCAATTGAGCAAGTGGGTGGAATTTATGTTGTAACTGCTGACCACGGAAATGCA GAGGACATGGTGAAGAGGGACAAATCTGGAAATCCTCAACTTGACAAGAATGGAAAAATCCAGATTCTCACTTCTCACAC TCTTGAGCCAGTAAGTTTGAGAAATTTTAGTTGTTCATTGATAAGAACTTTACTTAAAATACAATAACATGCTTCTCTGC CTTTAGCGAGTTATGGATGACCTGTGGTAGCTCTTGCTAAACCATTGTTTAGCTGTTATTTTAGAGGTTTTGTTAACTAA CTTGGACTAAAGTGCCTAAGCATTGACCTCTTATTTCAAAATTGGTGGCCTTACCAAGCAGTTAAAAATAGCCCAGATGT GTATTTTTGCTTGAGTTCTAATCTTTAATTTGCCCTGGCTTGTGAAGGTGCCACTTGCGATTGGAGGCCCTGGACTGTCA GCTGGTGTCAGGTTCCGCAGTGATGTTCCCACCGGAGGCCTGGCCAATGTCGCAGCTACTGTGATAAATCTCCATGGATT TGAGGCTCCCAGCGACTACGAGACAACTCTGATAGAAGTAGTTGATAAATAG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0053400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAAGCCAGTGGAAGTTGAATGATCACCCTAAGCTTCCAAAGGGGAAGCAGATTGCCATGGTGGTTTTGGATGGTTG GGGTGAGGCCAAACCTAATGAGTACAACTGCATCCACACTGCCGAGACACCTACTATGGATTCTCTCAAAAACGGTGCAC CTGAGAGGTGGAGATTGGTTAAGGCTCATGGGAAAGCTGTGGGGCTTCCTACTGATGATGATATGGGCAACAGTGAAGTT GGTCACAATGCTCTTGGTGCTGGCCGTATATATGCTCAGGGTGCTAAGCTTGTTGACATTGCTCTTGAATCTGGGAGCAT TTATGAAGGAGAAGGTTTCAAGTACATAAAGGAATGTTTTGAAACTGGCACATTGCATCTCCTTGGGTTACTAAGTGACG GTGGAGTCCACTCCAGACTTGACCAGTTGCAGTTGCTCCTTAAAGGTGTTAGTGAGCGAGGTGTTAAAAGAATTCGTTGT CATATTCTTACGGATGGCCGTGATGTTTTAGATGGCTCAAGTGTCGCATTTGTTGAAACTCTTGAAGATGATCTAGCGAA ATTGCGTGAAAAAGGCATTGATGCAAGGATAGCATCAGGTGGAGGTCGAATGAATGTCACTATGGACCGTTATGAGAATG ACTGGAGCGTTGTTAAACGAGGGTGGGATGCTCAAGTTCTTGGTGAAGCCTCTCATAAGTTTACTAGTGCTCTTGAAGCT GTCAAGACACTGAGGGCAGAACCAAAAGCCAATGACCAGTATCTTCCTCCTTTTGTTATCATTGATGAGAGTGGGAAGCC TGTTGGCCCAATAGTTGATGGAGATGCTGTTGTTACATTGAACTTCCGAGCAGATCGTATGGTTATGATTGCTAAAGCTC TTGAATATGAAAATTTTGACAAATTTGACAGAGTTCGTGTCCCTAAGATTCACTATGCTGGAATGCTTGAATATGATGGT GAATTGAAGCTTCCAAGGCATTACCTTGTTTCTCCACCATTGATTGAAAGAACATCTGGAGAATATTTAGTGAATAATGG TATTCGGATTTTCGCTTGCAGTGAGACTGTTAAATTTGGTCACGTCACATTCTTCTGGAATGGAAACCGCTCTGGGTATT TTAACCCGGCAATGGAGGAATATGTGGAAATTCCTAGTGATAGTGGGATTACATTCAACGTCAAACCAAAGATGAAGGCA GTGGAGATTGCTGAAAAGGCAAGAGATGCAATTCTTAGCAAGAAATTTGATCAGGTACGTGTTAACCTCCCAAATAGTGA TATGGTGGGGCATACAGGTGACATTGAAGCAACAGTTGTGGCTTGCAAGGCTGCTGATGAGGCTGTAAAGATGATCCTTG ATGCAATTGAGCAAGTGGGTGGAATTTATGTTGTAACTGCTGACCACGGAAATGCAGAGGACATGGTGAAGAGGGACAAA TCTGGAAATCCTCAACTTGACAAGAATGGAAAAATCCAGATTCTCACTTCTCACACTCTTGAGCCAGTGCCACTTGCGAT TGGAGGCCCTGGACTGTCAGCTGGTGTCAGGTTCCGCAGTGATGTTCCCACCGGAGGCCTGGCCAATGTCGCAGCTACTG TGATAAATCTCCATGGATTTGAGGCTCCCAGCGACTACGAGACAACTCTGATAGAAGTAGTTGATAAATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0053400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSQWKLNDHPKLPKGKQIAMVVLDGWGEAKPNEYNCIHTAETPTMDSLKNGAPERWRLVKAHGKAVGLPTDDDMGNSEV GHNALGAGRIYAQGAKLVDIALESGSIYEGEGFKYIKECFETGTLHLLGLLSDGGVHSRLDQLQLLLKGVSERGVKRIRC HILTDGRDVLDGSSVAFVETLEDDLAKLREKGIDARIASGGGRMNVTMDRYENDWSVVKRGWDAQVLGEASHKFTSALEA VKTLRAEPKANDQYLPPFVIIDESGKPVGPIVDGDAVVTLNFRADRMVMIAKALEYENFDKFDRVRVPKIHYAGMLEYDG ELKLPRHYLVSPPLIERTSGEYLVNNGIRIFACSETVKFGHVTFFWNGNRSGYFNPAMEEYVEIPSDSGITFNVKPKMKA VEIAEKARDAILSKKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMILDAIEQVGGIYVVTADHGNAEDMVKRDK SGNPQLDKNGKIQILTSHTLEPVPLAIGGPGLSAGVRFRSDVPTGGLANVAATVINLHGFEAPSDYETTLIEVVDK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31637:SF7
2 556 555 0.0 –
PANTHER
PTHR31637
2 556 555 0.0
IPR005995
PIRSF
PIRSF001492
12 554 543 3.6E-168
IPR005995
Pfam
PF01676
17 542 526 5.0E-113
IPR006124
TIGRFAM
TIGR01307
17 547 531 2.1E-107
IPR005995
CDD
cd16010
17 551 535 0.0
IPR005995
SUPERFAMILY
SSF53649
18 545 528 2.62E-48
IPR017850
Gene3D
G3DSA:3.40.720.10
19 543 525 3.6E-174
IPR017850
Gene3D
G3DSA:3.40.1450.10
93 335 243 3.6E-174
IPR036646
SUPERFAMILY
SSF64158
93 328 236 1.7E-58
IPR036646
Pfam
PF06415
99 319 221 5.5E-56
IPR011258

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004619
Molecular function Phosphoglycerate mutase activity Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0006007
Biological process Glucose catabolic process The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose.
Subterm of
GO:0030145
Molecular function Manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.
Subterm of
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0053400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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