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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0337700 |
| Transcript ID | LotjaGi1g1v0337700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non specific phospholipase C; TAIR: AT3G48610.1 non-specific phospholipase C6; Swiss-Prot: sp|Q8H965|NPC6_ARATH Non-specific phospholipase C6; TrEMBL-Plants: tr|A0A151TRC4|A0A151TRC4_CAJCA Phospholipase C 3; Found in the gene: LotjaGi1g1v0337700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:79811290..79813848) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCTTTCCTCTCTCATCTCCTTCTGCTGCTACTCATTGCCACTGCACACACTCTCCATTCCTTCCATTTCTCATCCTT TTGGATTGAAATCAGCATACCCATTTGGCAAAAGACTCCACCTTTGCAGCCAACAATGGGATTCACCAAACCCAAATCCT CCATTCTCTCACTCCTTCTCATAGTGTTAACTGTTTTTGCAACTGCACAACAGCAACAGCAGCAACCTATCAAAACTGTT GTTGTTTTGGTCATGGAGAATCGTTCCTTTGACCACATGCTGGGGTGGATGAAGAAAGCCATCAACCCATTAATCGATGG TGTCAATGGAGATGAATGCAACCCTGTTAACACCACAAATCCAAAGCATAACTCTATTTGCTTCACTGATGATGCTGAGT TTGTGGATCCGGATCCGGGGCATTCGTTTGAGGATGTTTTGCAACAGGTATTTGGTTCTGGTCCTCTTCCTTCTATGGAT GGGTTTGTGGAACAAGCAATGTCATTGTCTCAGAATCTCTCTGAGACTGTGATGAAAGGGTTTAAGCCTGAATCTGTGCC TGTTTATGAAACTCTGGTTAGAGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCGGGTCCAACTCAACCTAATA GGCTTTTTGTATACTCTGCTACTTCTCATGGTGCAACAAGTCATGTCAAGAAGCAGTTAGCAATAGGGTATCCTCAAAGA ACCATCTTTGACTCAATGCATGAGAATGGCTTAGATTTTGGGATTTATTTTCAGAACATACCAACAACCCTGTTTTATAG AAACCTGAGGAAGTTGAAATACATAAAGAAATTCCATCAGTTTGATTTGAAGTTCAAGAGAGATGCTAGAGATGGGAAGC TTCCACCATTGACTGTAATTGAGCCTAGGTACTTTGACTTGACTGGCTTGCCTGCAAATGATGACCACCCATCTCATGAT GTTGCAAATGGGCAAATGCTGGTTAAGGAGGTTTATGAGGCTCTCAGAGCAAGCCCTCAGTGGAATGAAACTCTTCTGGT TATTACATATGATGAACATGGTGGATTCTTTGATCATGTGCAGACTCCTTTTGTCAACATTCCTAATCCAGATGGGAACA CTGGACCTGCTCCTTATTTCTTCAAGTTTGATAGGCTAGGCGTTCGGGTGCCAACTATCATGGTCTCTCCTTGGATAAAG AAAGGGTCTGGTAAGCTCAAAATCCTCTAGTGAAAGCAAAATCTTGGTAGACAAAAGCAAGATCCCTTAGCTTTTGCTTC TGGCCACCATAATTTTGGCTTCACAATGGTTTTCGTTTCCAAACATGCACTTAGTTTATCATTTTTTTCGCATCTCCTCT TTGATCAAAGCCATTATACATGCATATTTTTATGATAGAGATGTCAGATGATTGTGTCTAATGCTTCTCTAACGAGGACA ATGGTAGTTGGGAAGTTTTTTTCTATTGGATGCTACATTTAATTTTCCAGGACTATTGCCCTTTGTGTTCACGGGTATTC AGTATTCCAATGCCTTTACTTTGTCGGATATCCTTCCCCCTGAGATGCATTTTGTTGATTTTTCTTGTCATTTCCTTTGT GTTTTGAGTAGAGTAAGGATTAAGATATGTTGTTTTCTAGTGTAATTAAGTCAACAAAACTTGACTTTAAATAATTTGGT TTCATGAAAATGGTTTACCTAACCTCTTTTGGTGCATATGTTAGATTCTCGAGATTCAAGTTCAACCTAGTTTTGATTGG TTCAATATGCCTACTAACTTACTTCCTTGATCCGGTTCCTCAGTGATAGGTGGCCCCAAAGGACCTGCTGAAAACTCTGA GTTTGAGCACTCCTCTATTCCTGCCACCATAAAGAAGATGTTCAACCTATCCTCTAACTTTTTGACGCACAGAGATGCAT GGGCTGGGACATTTGAGCATGTTGTTGGGGACCTAAGTGCACCAAGAACAGATTGCCCAGGTACTCATTCCCCTTTTTCA TGCCAGTTAATTGAGTTCCTCAACTCAATATACTTGAATATGAATTACTACATGATAAAAAAGCTGAAATAGTAATGACA TTAGTAGTATATGTGCTGTATTTACTATTTAGTAAGTGAACACTAAAAGTATTAAGTACATGTTTGGAAAATCTTTTACA ATTGATTCTGAAACCCAAAGTCAATTCCTAGAAGTGAATTGGCTTTTGTGCCTGCTACTCAAACCACACCCACTAAGAGA GTTTAACATGTGTTTTCCAGTGACTTTGCCGGATGTGACGCCCCTAAGGAAAACTGAAGCAAAGGAAAATGCTGGTCTGT CTCAGTTTCAGAGTGAGGTAGTTCAGCTGGCAGCTGTTCTCAATGGAGACCACTTCTTGAGCAGTTTTCCAGATGAAATG AGCAAAAAGATGAGTGTGAAGGAAGCTCATGAGTATGTAAAGGGAGCTGTTTCAAGATTCATAAGAGCTAGCAAAGAGGC CATCAAGTTGGGGGCAGATGAGTCTGCTATAGTGGATATGAGATCATCTCTCACTACTAGATCTTCCATTCACAATTGA
CDS sequence (LotjaGi1g1v0337700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTCACCAAACCCAAATCCTCCATTCTCTCACTCCTTCTCATAGTGTTAACTGTTTTTGCAACTGCACAACAGCA ACAGCAGCAACCTATCAAAACTGTTGTTGTTTTGGTCATGGAGAATCGTTCCTTTGACCACATGCTGGGGTGGATGAAGA AAGCCATCAACCCATTAATCGATGGTGTCAATGGAGATGAATGCAACCCTGTTAACACCACAAATCCAAAGCATAACTCT ATTTGCTTCACTGATGATGCTGAGTTTGTGGATCCGGATCCGGGGCATTCGTTTGAGGATGTTTTGCAACAGGTATTTGG TTCTGGTCCTCTTCCTTCTATGGATGGGTTTGTGGAACAAGCAATGTCATTGTCTCAGAATCTCTCTGAGACTGTGATGA AAGGGTTTAAGCCTGAATCTGTGCCTGTTTATGAAACTCTGGTTAGAGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCA ATTCCGGGTCCAACTCAACCTAATAGGCTTTTTGTATACTCTGCTACTTCTCATGGTGCAACAAGTCATGTCAAGAAGCA GTTAGCAATAGGGTATCCTCAAAGAACCATCTTTGACTCAATGCATGAGAATGGCTTAGATTTTGGGATTTATTTTCAGA ACATACCAACAACCCTGTTTTATAGAAACCTGAGGAAGTTGAAATACATAAAGAAATTCCATCAGTTTGATTTGAAGTTC AAGAGAGATGCTAGAGATGGGAAGCTTCCACCATTGACTGTAATTGAGCCTAGGTACTTTGACTTGACTGGCTTGCCTGC AAATGATGACCACCCATCTCATGATGTTGCAAATGGGCAAATGCTGGTTAAGGAGGTTTATGAGGCTCTCAGAGCAAGCC CTCAGTGGAATGAAACTCTTCTGGTTATTACATATGATGAACATGGTGGATTCTTTGATCATGTGCAGACTCCTTTTGTC AACATTCCTAATCCAGATGGGAACACTGGACCTGCTCCTTATTTCTTCAAGTTTGATAGGCTAGGCGTTCGGGTGCCAAC TATCATGGTCTCTCCTTGGATAAAGAAAGGGTCTGTGATAGGTGGCCCCAAAGGACCTGCTGAAAACTCTGAGTTTGAGC ACTCCTCTATTCCTGCCACCATAAAGAAGATGTTCAACCTATCCTCTAACTTTTTGACGCACAGAGATGCATGGGCTGGG ACATTTGAGCATGTTGTTGGGGACCTAAGTGCACCAAGAACAGATTGCCCAGTGACTTTGCCGGATGTGACGCCCCTAAG GAAAACTGAAGCAAAGGAAAATGCTGGTCTGTCTCAGTTTCAGAGTGAGGTAGTTCAGCTGGCAGCTGTTCTCAATGGAG ACCACTTCTTGAGCAGTTTTCCAGATGAAATGAGCAAAAAGATGAGTGTGAAGGAAGCTCATGAGTATGTAAAGGGAGCT GTTTCAAGATTCATAAGAGCTAGCAAAGAGGCCATCAAGTTGGGGGCAGATGAGTCTGCTATAGTGGATATGAGATCATC TCTCACTACTAGATCTTCCATTCACAATTGA
Protein sequence (LotjaGi1g1v0337700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFTKPKSSILSLLLIVLTVFATAQQQQQQPIKTVVVLVMENRSFDHMLGWMKKAINPLIDGVNGDECNPVNTTNPKHNS ICFTDDAEFVDPDPGHSFEDVLQQVFGSGPLPSMDGFVEQAMSLSQNLSETVMKGFKPESVPVYETLVREFAVFDRWFSS IPGPTQPNRLFVYSATSHGATSHVKKQLAIGYPQRTIFDSMHENGLDFGIYFQNIPTTLFYRNLRKLKYIKKFHQFDLKF KRDARDGKLPPLTVIEPRYFDLTGLPANDDHPSHDVANGQMLVKEVYEALRASPQWNETLLVITYDEHGGFFDHVQTPFV NIPNPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGSVIGGPKGPAENSEFEHSSIPATIKKMFNLSSNFLTHRDAWAG TFEHVVGDLSAPRTDCPVTLPDVTPLRKTEAKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVKGA VSRFIRASKEAIKLGADESAIVDMRSSLTTRSSIHN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| PANTHER | 13 | 515 | 503 | 6.7E-295 | – | |
| PANTHER | 13 | 515 | 503 | 6.7E-295 | ||
| Gene3D | 21 | 190 | 170 | 2.0E-19 | ||
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 516 | 490 | - | – | |
| Pfam | 32 | 387 | 356 | 8.8E-107 | ||
| SUPERFAMILY | 162 | 385 | 224 | 8.83E-7 | ||
| Gene3D | 258 | 436 | 179 | 7.4E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi1g1v0337700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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