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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018240
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.658s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4790740.1
n.a. PREDICTED: AP-3 complex subunit mu-1-like [Cicer arietinum] gi|502113052|ref|XP_004494527.1| chr1 57719058 57721595 -
2 domain predictions
3 GO terms
Lj2g3v1415400.1
n.a. PREDICTED: AP-1 complex subunit mu-1-like [Glycine max] gi|356497456|ref|XP_003517576.1| chr2 22438947 22442672 -
3 domain predictions
3 GO terms
Lj2g3v1984990.1
n.a. PREDICTED: AP-2 complex subunit mu-like [Cicer arietinum] gi|502160553|ref|XP_004511783.1| chr2 29263720 29269531 +
2 domain predictions
3 GO terms
Lj4g3v1083800.1
n.a. PREDICTED: AP-1 complex subunit mu-1-I-like [Glycine max] gi|356501761|ref|XP_003519692.1| chr4 15577947 15581761 +
2 domain predictions
3 GO terms
LotjaGi1g1v0748800.1
n.a. AP-3 complex subunit mu; TAIR: AT1G56590.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|F4I562|AP3M_ARATH AP-3 complex subunit mu; TrEMBL-Plants: tr|A0A0B2P3M3|A0A0B2P3M3_GLYSO AP-3 complex subunit mu-1; Found in the gene: LotjaGi1g1v0748800 LjG1.1_chr1 132127509 132132140 -
2 domain predictions
3 GO terms
LotjaGi1g1v0748800.2
n.a. AP-3 complex subunit mu; TAIR: AT1G56590.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|F4I562|AP3M_ARATH AP-3 complex subunit mu; TrEMBL-Plants: tr|A0A151TW96|A0A151TW96_CAJCA AP-3 complex subunit mu-1; Found in the gene: LotjaGi1g1v0748800 LjG1.1_chr1 132129817 132131954 -
2 domain predictions
3 GO terms
LotjaGi2g1v0323900.1
n.a. AP-1 complex subunit mu-1; TAIR: AT1G60780.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2; TrEMBL-Plants: tr|I1J553|I1J553_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0323900 LjG1.1_chr2 79899541 79906354 -
3 domain predictions
3 GO terms
LotjaGi2g1v0415100.1
n.a. AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|I3SG06|I3SG06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 LjG1.1_chr2 91297033 91303278 +
2 domain predictions
3 GO terms
LotjaGi2g1v0415100.2
n.a. AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|A0A0R0JTT3|A0A0R0JTT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 LjG1.1_chr2 91297334 91302453 +
2 domain predictions
3 GO terms
LotjaGi2g1v0415100.3
n.a. AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|I3SG06|I3SG06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 LjG1.1_chr2 91297334 91302453 +
2 domain predictions
3 GO terms
LotjaGi2g1v0415100.4
n.a. AP-2 complex subunit mu; TAIR: AT5G46630.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O23140|AP2M_ARATH AP-2 complex subunit mu; TrEMBL-Plants: tr|I3SG06|I3SG06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0415100 LjG1.1_chr2 91297334 91302453 +
2 domain predictions
3 GO terms
LotjaGi4g1v0156900.1
n.a. AP-1 complex subunit mu-1; TAIR: AT1G60780.1 Clathrin adaptor complexes medium subunit family protein; Swiss-Prot: sp|O22715|AP1M2_ARATH AP-1 complex subunit mu-2; TrEMBL-Plants: tr|I1N1K1|I1N1K1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0156900 LjG1.1_chr4 27295873 27304320 -
3 domain predictions
3 GO terms