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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018955
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.642s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0267339.1
n.a. PREDICTED: Pyruvate dehydrogenase [lipoamide] gi|356556464|ref|XP_003546545.1| chr0 138509658 138509880 +
3 domain predictions
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Lj0g3v0267349.1
n.a. PREDICTED: Pyruvate dehydrogenase [lipoamide] gi|356556464|ref|XP_003546545.1| chr0 138509827 138512907 +
4 domain predictions
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Lj4g3v2249050.1
n.a. PREDICTED: Pyruvate dehydrogenase [lipoamide] gi|356556464|ref|XP_003546545.1| chr4 30983228 30985497 -
4 domain predictions
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LotjaGi4g1v0313600_LC.1
n.a. Pyruvate dehydrogenase kinase; TAIR: AT3G06483.1 pyruvate dehydrogenase kinase; Swiss-Prot: sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase ](acetyl-transferring)] kinase, mitochondrial; TrEMBL-Plants: tr|A0A0S3RH61|A0A0S3RH61_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0313600_LC LjG1.1_chr4 69043217 69046704 +
2 domain predictions
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LotjaGi6g1v0217100.1
n.a. Mitochondrial pyruvate dehydrogenase kinase; TAIR: AT3G06483.1 pyruvate dehydrogenase kinase; Swiss-Prot: sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase ](acetyl-transferring)] kinase, mitochondrial; TrEMBL-Plants: tr|I3S8V4|I3S8V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0217100 LjG1.1_chr6 51899282 51905333 +
2 domain predictions
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LotjaGi6g1v0217100.2
n.a. Mitochondrial pyruvate dehydrogenase kinase; TAIR: AT3G06483.1 pyruvate dehydrogenase kinase; Swiss-Prot: sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase ](acetyl-transferring)] kinase, mitochondrial; TrEMBL-Plants: tr|I3S8V4|I3S8V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0217100 LjG1.1_chr6 51901692 51904180 +
2 domain predictions
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