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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0217100 |
| Transcript ID | LotjaGi6g1v0217100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial pyruvate dehydrogenase kinase; TAIR: AT3G06483.1 pyruvate dehydrogenase kinase; Swiss-Prot: sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase ](acetyl-transferring)] kinase, mitochondrial; TrEMBL-Plants: tr|I3S8V4|I3S8V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0217100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51899282..51905333) extracted from Lotus japonicus Gifu genome v1.2.
AGTGATGATCCTTTGCCTATAAAATACACTACTACTTATATTTTGATCCCAATTGTGAAGTTTGGACAAGTGAGAGTGGG TGCAGAATCTATATTGTTTTATAGAAAAGAATCTGATTAATTATGACCCTACTTGTATCTTTAATTTGCTTTCTCACCTA ATTAAAAGGACATTTTGTGAACTCCTCTTCAAGTTGCTTTTTGAAGGACAAGAAATTATTATATATAAGACCACAGGTGT TGGAGCTACACACACATACACAGTTCCATCTTTATCTTCAAGCAATTAAGCACTGTTGAAGTGGATTGGATTAGTGATTG TGCTGTGAGCTAGGACCACGCAACTCACAATCAGGCCTGCATCTTCTGGTACACTCCAGTAAGCCAAGCACTTATCCTTC ATTCCTTCCTTCTTCAATTATTTCAAGTGACTGTGTATGATGATGATCAATCAAGTGCATTGTATTAATTATATTGATTG AGATATTATAGGTTTTGTAGAAATTCTTTTACTTGTTCATTCCCAACTTTTACAAACATTATGAGAAAAACTCATTAATC AATTTCTTATCCACTATCACTGACTCAGCGTATTAATAAGAGATTACTCTCACAATTATACAAAATACTTTTAATATTTG GATAATGGTGCAATGAGTTAAGGAAAAAAAGTAGTACTTAAGATAGTCCAATCACAATGTGCTTAGGATGGTCCACGAGT CCATCTCAATTCTTAACCTATATATAGCTATTATTAAAAGTGACAATGCAATAATCCAAAAATCGTGATCATTGCTTTAA ATTAAACTTTTCTCAAGTAGTATTAGTTTTTAATATTTTAGCGTTTTAAGATAACCTTAAACTCTATGCAAATGCTCTAA ACTGCGGATGGTCCTATAGATGGTATTGCTGATTTGTTGAAGGCTGACCTCATGGGCGCTTCATTCTTCATTCATGATGG TCTAACACTCTAACTTCCTTTCTCTTTTTTCTTTCTTTACATTTGTGTATAAAAAACGCTCTAAACTGCTTCCCTTTTTC CATTGATCTGAAGTTGAAACATTAATCAACGCATTGAATTCGTTAGTTGTGCGTAGTATATCTATTAGAAAACGAAAGCT CTATATAAGTAAAGTTATGTAGATTTGGTAATTTTCTAATTAAATAATAATGTCAAATTTGAGAAGATCTTTTTTGCTTT AATTTTTGTATGTAAATTATGTCAGTGTCTAGTGTGTACTTTTTCAGTTTTTTGCACCATTGTGTTTTACAATTAGAATA TCTCTCATGTTTGGAGTCCGGATTTACGGCTTTGTGTACGTCTACATGATAAAATTTGAAGTACAAAAATAAAAATAGGA AAAAAGTATTCTAAATTAAAAAATTTCAATTTGTTTATAGTCTTGGGTCTTGGCACCTATGCCAAAGGCTATAAAATATT AGAGGCAACAATTGGGTGTTCTATTGAGTCATTGACAATAACATTTCTTGTACTAATCTCTACACATTTTTCATCATAAT TTTGTTTAGATTTTTTTTTTATTGTATCACTCATAGTATTTCTCGCTTTTTTTCTCATTTATTTTTATAGTTTTATAGCT TCCATATATCATATATTGATTTTAATGTGTTGATTCATAACGTAAAGAGAGAGTTTAATTACTATGAAGAAGGTAAAACT TTTTTTCCATAACCATTCAATTAGAATTTATTAATTTGTAATTTCATAATTAAATTTTAATTAAAAATTATTTAAATGGA AATGAAGAAATGTGACGGGATGTCTGTATATAAAGCTCTTTACAGTTTACAGTATCAGTGTACATAAATTAAATTCATAC TTATATTATATTGTGCAAAAAAAAGAAAATATTCTAAGAAAACTTTGATTCTCACTAACCATGGTGACAAACAATCTGCA AGAACCTTTATAAGCAATCTGTAATGTAATCCTAAGGACACGCATCCATGATGGTAACCGGAGCTGAACCCACTATCATT AAGATAATATTTCAAGATGATTTAAAATCATTAATTAATTAACCAAAAAAAACTAAAGCATGGGTTAGAGACCATAATAG ATTACCTTAAACATAAAAAAAAGACCACAATAGCGTACTTGCCGAAAATTGGGGCTTATCTGGACACGTGTCAGAAGCAC ATGATTCCCACATTCCAAAAAAACGTGAAAGCCATCAAATTAAAGCTTGTTCTTCAAATTTGCCAAATAGATTCAATTCA ATCAATCAATCAATCAATCTTTCTCCTCTCATCTCCATTTCAATTCCAACCCCTCTTTTCCATTTTCAGTCACAACCCAT CTTCACCATTTTCTTCTCCTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTGATGTCAGTTTTGCATTGAT TTCAATAGCCATGGCTGCAAAGAAGGCCTGTGAGACATTCTCCAAGGCCTTGATGGAGGATGTGCACAGATGGGGTTGTA TGAAGCAAACAGGGGTGAGTTTGAGGTACATGATGGAATTTGGGTCAACACCTACTGAGAAGAATTTGCTGATCTCTGCT CAGTTTCTTCACAAGGAGCTTGCAATCAGGATTGCTAGGAGAGCAATTGAGCTTGATAGTCTTCCCTATGGTTTGTCTAA GAAACCTGCTGTTATAAAGGTATCATCATTTTTTAATTTTACATTGTAAATAGAATCATGGGTTGTTGTTATCTTTTGTG TTGATTCTGTTTCATTTGCTTTTGAGGACACTTTTGATTATTTGATCTTATCTCTTTGTGGGGAAAAGGTGGAAAGGGCT TGAATGTTTTCTTGTAATTATTTTATTGTTCCTGAGGTAATCATGCGCATTTGGATCTAAGAAATTGACTAACTTTTGAA AAGATAGGATTTTAATTAGAAAATTGTTTGTGATTAGCATTATAAGATGATGTAGGAACCTTTCTTGTCGTGTCAAATCA TCTTTGTAATTGGCTTGGCATGTTAGCACATGATTATAATTGTTTATTGGAATTATGTTAACAAAAAGCTTAACATGTTG GGTGGAGGTTACTGTTTATCTATGCCTCTATCTCTCATCCCTTCCACATGAAGGGCTTGGAACATGGACAATGTTACTAT GCACTCAAACTATAATTTAATTAGAAGAATCAAAATTCTAACTAATTGGTTTGATCTTTAAAATTTGATATTGATTAATT TCTCTCAAGTTTGCTACAAGGTTGGATGGTTTAATCACTATATTAGGGAAACAGTTGTGCTCCTTCTTCTGCACATGTTT AATTTTCTTACAACAACTTTCCTCCCATTAATATATCCAAAATATAATCATTGATGGTATTAAATTCAATAATTCTTGAT AATAGCAGATACCATAGCTCATTGTGGCTGAGCTCCTGTTCTAAGATCCTTATGATGTTAGTTTATGATGCTCCTGGTGT GTTTATGGTGTGTGCTTTATGGCAATTTGAGCCACATTAGGAAGTAGAGCTCACTGTATAATTAGCTTAATGGTTGTTGA CTATTATGCTCTATTTTTATGATTTTAGGTTAGGGATTGGTATGTGGATTCTTTCCGTGATCTTAGGTCGTACCCTGACA TCAAGAACATGACTGATGAAAAAGATTTCACTGAAATGATCAAGGCCATCAAAGTGAGACACAACAATGTGGTACCTACA ATGGCCTTAGGTGTTCAGCAATTGAAGAAAGGTATGGATCCAAAGATTGTATATGAAGACCTTATTGAGATTCATCAGTT TCTCGATCGCTTTTACATGTCAAGAATTGGAATCCGCATGCTCATTGGTTAGTTCAGAAAACTCTGTCTGCCTTCTACAA GACTTAGCAGATTATTGGCTACCTTTTTTTCCTTCCTATTTGAATCTTTGTAGTGCACGTATTAAACCTAATTGTATTGT ATGTTCTTTTGACTTTTGTGGGATTCAGGGCAGCATGTGGAGTTGCACAATCCCAATCCAGCTCCCCATTGCATAGGTTA TATACATACAAAAATGTCTCCTGTGGAGGTGGCGAGGAATGCCAGTGAGGATGCACGCTCTATATGTTGTCGTGAATATG GCAGTGCCCCTGATGTTCAAATTTATGGAGATCCTGATTTTACTTTTCCGTGAGTTACATCTTCCCTGTATTAATTTTCC TTTAGGTTGCTTTCGTTTACATCCATGACTCTCACAAGCTTATGTATGGCTCCGTTCTCTTCCCTTTCAGAGCATCTGTC TTAGCTCGGAATGGTTATCTCATAAGGATATATAGTTTTAGTTCCAAAGTTATTTCTGTACTCTTTCTATATAATCACTG TATGTTCTCAACCAGGTATGTTCCGGCTCACTTGCATCTTATGGTATTTGAGTTGGTCAAAAACTCACTGCGTGCTGTCC AAGAGCGTTTTATAGATTCTGATAACGTTGCACCTCCTGTTAGAATAATAGTTGCTGACGGGTTAGAGGATGTTACCATA AAGGTGCACATTAACTTTTGTAGTGAAGTTATTAAGTTTTTTACTTACCTTTTTGGTGGGATTTTTGGGCTTTATTGTGG GATTTTTGGAATGCTATGATGAAGATGCTTTGTCAAAAAAAGTTGGTCTAAATATTGTAGGTTTCAGATGAGGGAGGTGG AATACCAAGAAGTGGTCTGCCGAAAATTTTTACATATCTATACAGTACAGCCAGAAACCCATTGGATGAGCATGAGGATC TTGGATTAGGTGATAATGTGACAATGGCTGGATATGGATATGGAATTCCTATTAGTCGCCTATATGCTCGGTATTTTGGA GGTGATCTTCAAATAATCTCTATGGAAGGATATGGTGAGTAGACTTCTCTTCATGACTATTTTTCTGATAGATTTCATAG TTACTATTTATGTCCCTGAGATCAGTCTGAACTGCTACAAGAATAATTGTTATTCTGAATTATCAAGTCAATGTTGTTTC TTCCATTAGTTATAGTCAGTCATTACAGAGTGTGTTTGGTTGAGCATGTGCTCAAAATCCAAGGCACGGTAGAGGAAAGC TACAACTTATAGCCTATAGTTTAGAAGTGATTTTGGTGTCTTCCGTGGTATTCCACCGTGTTTCCAAACACACTAATATT AGGACTTGATGAGGTTTTACCATCTCAGAACTAGATTACTTGTATATCTTAACAGATATTTTATGATTGCATTTTTAGAG TACTGGTTTGTTGTTGTCTTAACTACTTGTTTACCTTTACTTTTAGTTGCTTCAAGTTCAAGTTTTGTGATGCAGTCATT GGTTGTTTCTTCGCAGGAACTGATGCATATCTTCATTTGTCTCGTCTGGGAGATTCACAAGAACCATTGCCCTGAAAGTA GTGGGCCGTTTTCCTTTCAACCAAACTCAGTTACAGTAAGTAACTTGGAAAAACAAAAAAACAGTTGCAACAAGGACCAT TTGCTGTCAATTTTTTATATTTTAATAAATTGACAGATTTCTTGTAAGTAAGTCATACATAAGATTGTGTTTGATTAAAG GTCCTTTCTTTGCCTTTGCATCCTGCTTTGGAAATCCGTCCTTATTTTATTTTTCTTTTTTTATGACGAATTCGCATTCG GCCCTTTTATCTTAAAGGAAAATGTTCCATAAGACAAATCAGGCCATGTTGTGTCTTGACATAGTCTCCTCTAGAGTCAT AAAATGGAGAAGGTTGAGCATTAACCAGAGTACCAAACTAATAAAAGCACGGTTTTCATTGATACTATGGTCACTATCTG TTTCTAAACTGTAACTTCTCACGCTTCTTTGATACCCCAATGGCATGGAAACTCCTTAGACAAAATTCAGTATAATGTCA AAAACTGAGGAAATTCAGAGTGTGACATGTGAATTGCTGACCTTTATCTTCATCTCTTTAACCTTTCATTTGCTAAAAAA ATTAGTTGATAAAACAAAAGTTATTTGTGTATATGTAGTATGTACATGATATTGTGTAACTGCAACGGGTTATTGTTTTG TGTAACATCATCTATTTTTTTTTCTTCTTTTTCTAACATCATAAAGAAACGC
CDS sequence (LotjaGi6g1v0217100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAAAGAAGGCCTGTGAGACATTCTCCAAGGCCTTGATGGAGGATGTGCACAGATGGGGTTGTATGAAGCAAAC AGGGGTGAGTTTGAGGTACATGATGGAATTTGGGTCAACACCTACTGAGAAGAATTTGCTGATCTCTGCTCAGTTTCTTC ACAAGGAGCTTGCAATCAGGATTGCTAGGAGAGCAATTGAGCTTGATAGTCTTCCCTATGGTTTGTCTAAGAAACCTGCT GTTATAAAGGTTAGGGATTGGTATGTGGATTCTTTCCGTGATCTTAGGTCGTACCCTGACATCAAGAACATGACTGATGA AAAAGATTTCACTGAAATGATCAAGGCCATCAAAGTGAGACACAACAATGTGGTACCTACAATGGCCTTAGGTGTTCAGC AATTGAAGAAAGGTATGGATCCAAAGATTGTATATGAAGACCTTATTGAGATTCATCAGTTTCTCGATCGCTTTTACATG TCAAGAATTGGAATCCGCATGCTCATTGGGCAGCATGTGGAGTTGCACAATCCCAATCCAGCTCCCCATTGCATAGGTTA TATACATACAAAAATGTCTCCTGTGGAGGTGGCGAGGAATGCCAGTGAGGATGCACGCTCTATATGTTGTCGTGAATATG GCAGTGCCCCTGATGTTCAAATTTATGGAGATCCTGATTTTACTTTTCCGTATGTTCCGGCTCACTTGCATCTTATGGTA TTTGAGTTGGTCAAAAACTCACTGCGTGCTGTCCAAGAGCGTTTTATAGATTCTGATAACGTTGCACCTCCTGTTAGAAT AATAGTTGCTGACGGGTTAGAGGATGTTACCATAAAGGTTTCAGATGAGGGAGGTGGAATACCAAGAAGTGGTCTGCCGA AAATTTTTACATATCTATACAGTACAGCCAGAAACCCATTGGATGAGCATGAGGATCTTGGATTAGGTGATAATGTGACA ATGGCTGGATATGGATATGGAATTCCTATTAGTCGCCTATATGCTCGGTATTTTGGAGGTGATCTTCAAATAATCTCTAT GGAAGGATATGGAACTGATGCATATCTTCATTTGTCTCGTCTGGGAGATTCACAAGAACCATTGCCCTGA
Protein sequence (LotjaGi6g1v0217100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAKKACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIRIARRAIELDSLPYGLSKKPA VIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVRHNNVVPTMALGVQQLKKGMDPKIVYEDLIEIHQFLDRFYM SRIGIRMLIGQHVELHNPNPAPHCIGYIHTKMSPVEVARNASEDARSICCREYGSAPDVQIYGDPDFTFPYVPAHLHLMV FELVKNSLRAVQERFIDSDNVAPPVRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDEHEDLGLGDNVT MAGYGYGIPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSQEPLP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 369 | 367 | 1.8E-217 | – | |
| Gene3D | 3 | 184 | 182 | 1.8E-61 | ||
| PANTHER | 3 | 369 | 367 | 1.8E-217 | ||
| SUPERFAMILY | 16 | 179 | 164 | 2.75E-55 | ||
| Pfam | 28 | 188 | 161 | 2.9E-54 | ||
| SUPERFAMILY | 190 | 358 | 169 | 1.83E-27 | ||
| Gene3D | 191 | 368 | 178 | 1.1E-50 | ||
| CDD | 193 | 359 | 167 | 2.65266E-79 | – | |
| SMART | 231 | 362 | 132 | 2.3E-11 | ||
| Pfam | 234 | 359 | 126 | 9.5E-14 | ||
| ProSiteProfiles | 236 | 362 | 127 | 17.432 | ||
| PRINTS | 276 | 290 | 15 | 1.5E-5 | ||
| PRINTS | 322 | 340 | 19 | 1.5E-5 | ||
| PRINTS | 346 | 359 | 14 | 1.5E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Biological process | Phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. | ||
| Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi6g1v0217100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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