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Lj4g3v2249050.1

Overview

Field Value
Gene ID Lj4g3v2249050
Transcript ID Lj4g3v2249050.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: Pyruvate dehydrogenase [lipoamide] gi|356556464|ref|XP_003546545.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11947
2 260 259 1.60E-172 –
Gene3D
G3DSA:1.20.140.20
2 81 80 8.70E-27
IPR018955
SUPERFAMILY
SSF69012
2 70 69 1.83E-21
IPR018955
Pfam
PF10436
2 79 78 1.10E-22
IPR018955
PANTHER
PTHR11947:SF24
2 260 259 1.60E-172 –
SUPERFAMILY
SSF55874
79 249 171 2.62E-29
IPR003594
Gene3D
G3DSA:3.30.565.10
83 254 172 2.20E-55
IPR003594
SMART
SM00387
122 253 132 2.70E-14
IPR003594
Pfam
PF02518
125 249 125 1.10E-14
IPR003594
ProSiteProfiles
PS50109
127 249 123 17.884
IPR005467
CDD
cd00075
127 249 123 4.61E-19 –
PRINTS
PR00344
167 181 15 5.00E-05
IPR004358
PRINTS
PR00344
213 231 19 5.00E-05
IPR004358

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016310
Biological process Phosphorylation The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj4g3v2249050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2249050.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.