Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0217100 |
| Transcript ID | LotjaGi6g1v0217100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial pyruvate dehydrogenase kinase; TAIR: AT3G06483.1 pyruvate dehydrogenase kinase; Swiss-Prot: sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase ](acetyl-transferring)] kinase, mitochondrial; TrEMBL-Plants: tr|I3S8V4|I3S8V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0217100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51901692..51904180) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGCAAAGAAGGCCTGTGAGACATTCTCCAAGGCCTTGATGGAGGATGTGCACAGATGGGGTTGTATGAAGCAAAC AGGGGTGAGTTTGAGGTACATGATGGAATTTGGGTCAACACCTACTGAGAAGAATTTGCTGATCTCTGCTCAGTTTCTTC ACAAGGAGCTTGCAATCAGGATTGCTAGGAGAGCAATTGAGCTTGATAGTCTTCCCTATGGTTTGTCTAAGAAACCTGCT GTTATAAAGGTATCATCATTTTTTAATTTTACATTGTAAATAGAATCATGGGTTGTTGTTATCTTTTGTGTTGATTCTGT TTCATTTGCTTTTGAGGACACTTTTGATTATTTGATCTTATCTCTTTGTGGGGAAAAGGTGGAAAGGGCTTGAATGTTTT CTTGTAATTATTTTATTGTTCCTGAGGTAATCATGCGCATTTGGATCTAAGAAATTGACTAACTTTTGAAAAGATAGGAT TTTAATTAGAAAATTGTTTGTGATTAGCATTATAAGATGATGTAGGAACCTTTCTTGTCGTGTCAAATCATCTTTGTAAT TGGCTTGGCATGTTAGCACATGATTATAATTGTTTATTGGAATTATGTTAACAAAAAGCTTAACATGTTGGGTGGAGGTT ACTGTTTATCTATGCCTCTATCTCTCATCCCTTCCACATGAAGGGCTTGGAACATGGACAATGTTACTATGCACTCAAAC TATAATTTAATTAGAAGAATCAAAATTCTAACTAATTGGTTTGATCTTTAAAATTTGATATTGATTAATTTCTCTCAAGT TTGCTACAAGGTTGGATGGTTTAATCACTATATTAGGGAAACAGTTGTGCTCCTTCTTCTGCACATGTTTAATTTTCTTA CAACAACTTTCCTCCCATTAATATATCCAAAATATAATCATTGATGGTATTAAATTCAATAATTCTTGATAATAGCAGAT ACCATAGCTCATTGTGGCTGAGCTCCTGTTCTAAGATCCTTATGATGTTAGTTTATGATGCTCCTGGTGTGTTTATGGTG TGTGCTTTATGGCAATTTGAGCCACATTAGGAAGTAGAGCTCACTGTATAATTAGCTTAATGGTTGTTGACTATTATGCT CTATTTTTATGATTTTAGGTTAGGGATTGGTATGTGGATTCTTTCCGTGATCTTAGGTCGTACCCTGACATCAAGAACAT GACTGATGAAAAAGATTTCACTGAAATGATCAAGGCCATCAAAGTGAGACACAACAATGTGGTACCTACAATGGCCTTAG GTGTTCAGCAATTGAAGAAAGGTATGGATCCAAAGATTGTATATGAAGACCTTATTGAGATTCATCAGTTTCTCGATCGC TTTTACATGTCAAGAATTGGAATCCGCATGCTCATTGGTTAGTTCAGAAAACTCTGTCTGCCTTCTACAAGACTTAGCAG ATTATTGGCTACCTTTTTTTCCTTCCTATTTGAATCTTTGTAGTGCACGTATTAAACCTAATTGTATTGTATGTTCTTTT GACTTTTGTGGGATTCAGGGCAGCATGTGGAGTTGCACAATCCCAATCCAGCTCCCCATTGCATAGGTTATATACATACA AAAATGTCTCCTGTGGAGGTGGCGAGGAATGCCAGTGAGGATGCACGCTCTATATGTTGTCGTGAATATGGCAGTGCCCC TGATGTTCAAATTTATGGAGATCCTGATTTTACTTTTCCGTGAGTTACATCTTCCCTGTATTAATTTTCCTTTAGGTTGC TTTCGTTTACATCCATGACTCTCACAAGCTTATGTATGGCTCCGTTCTCTTCCCTTTCAGAGCATCTGTCTTAGCTCGGA ATGGTTATCTCATAAGGATATATAGTTTTAGTTCCAAAGTTATTTCTGTACTCTTTCTATATAATCACTGTATGTTCTCA ACCAGGTATGTTCCGGCTCACTTGCATCTTATGGTATTTGAGTTGGTCAAAAACTCACTGCGTGCTGTCCAAGAGCGTTT TATAGATTCTGATAACGTTGCACCTCCTGTTAGAATAATAGTTGCTGACGGGTTAGAGGATGTTACCATAAAGGTGCACA TTAACTTTTGTAGTGAAGTTATTAAGTTTTTTACTTACCTTTTTGGTGGGATTTTTGGGCTTTATTGTGGGATTTTTGGA ATGCTATGATGAAGATGCTTTGTCAAAAAAAGTTGGTCTAAATATTGTAGGTTTCAGATGAGGGAGGTGGAATACCAAGA AGTGGTCTGCCGAAAATTTTTACATATCTATACAGTACAGCCAGAAACCCATTGGATGAGCATGAGGATCTTGGATTAGG TGATAATGTGACAATGGCTGGATATGGATATGGAATTCCTATTAGTCGCCTATATGCTCGGTATTTTGGAGGTGATCTTC AAATAATCTCTATGGAAGGATATGGTGAGTAGACTTCTCTTCATGACTATTTTTCTGATAGATTTCATAGTTACTATTTA TGTCCCTGA
CDS sequence (LotjaGi6g1v0217100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAAAGAAGGCCTGTGAGACATTCTCCAAGGCCTTGATGGAGGATGTGCACAGATGGGGTTGTATGAAGCAAAC AGGGGTGAGTTTGAGGTACATGATGGAATTTGGGTCAACACCTACTGAGAAGAATTTGCTGATCTCTGCTCAGTTTCTTC ACAAGGAGCTTGCAATCAGGATTGCTAGGAGAGCAATTGAGCTTGATAGTCTTCCCTATGGTTTGTCTAAGAAACCTGCT GTTATAAAGGTTAGGGATTGGTATGTGGATTCTTTCCGTGATCTTAGGTCGTACCCTGACATCAAGAACATGACTGATGA AAAAGATTTCACTGAAATGATCAAGGCCATCAAAGTGAGACACAACAATGTGGTACCTACAATGGCCTTAGGTGTTCAGC AATTGAAGAAAGGTATGGATCCAAAGATTGTATATGAAGACCTTATTGAGATTCATCAGTTTCTCGATCGCTTTTACATG TCAAGAATTGGAATCCGCATGCTCATTGGGCAGCATGTGGAGTTGCACAATCCCAATCCAGCTCCCCATTGCATAGGTTA TATACATACAAAAATGTCTCCTGTGGAGGTGGCGAGGAATGCCAGTGAGGATGCACGCTCTATATGTTGTCGTGAATATG GCAGTGCCCCTGATGTTCAAATTTATGGAGATCCTGATTTTACTTTTCCGTATGTTCCGGCTCACTTGCATCTTATGGTA TTTGAGTTGGTCAAAAACTCACTGCGTGCTGTCCAAGAGCGTTTTATAGATTCTGATAACGTTGCACCTCCTGTTAGAAT AATAGTTGCTGACGGGTTAGAGGATGTTACCATAAAGGTTTCAGATGAGGGAGGTGGAATACCAAGAAGTGGTCTGCCGA AAATTTTTACATATCTATACAGTACAGCCAGAAACCCATTGGATGAGCATGAGGATCTTGGATTAGGTGATAATGTGACA ATGGCTGGATATGGATATGGAATTCCTATTAGTCGCCTATATGCTCGGTATTTTGGAGGTGATCTTCAAATAATCTCTAT GGAAGGATATGGTGAGTAG
Protein sequence (LotjaGi6g1v0217100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAKKACETFSKALMEDVHRWGCMKQTGVSLRYMMEFGSTPTEKNLLISAQFLHKELAIRIARRAIELDSLPYGLSKKPA VIKVRDWYVDSFRDLRSYPDIKNMTDEKDFTEMIKAIKVRHNNVVPTMALGVQQLKKGMDPKIVYEDLIEIHQFLDRFYM SRIGIRMLIGQHVELHNPNPAPHCIGYIHTKMSPVEVARNASEDARSICCREYGSAPDVQIYGDPDFTFPYVPAHLHLMV FELVKNSLRAVQERFIDSDNVAPPVRIIVADGLEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDEHEDLGLGDNVT MAGYGYGIPISRLYARYFGGDLQIISMEGYGE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 351 | 349 | 4.9E-205 | ||
| PANTHER | 3 | 351 | 349 | 4.9E-205 | – | |
| Gene3D | 3 | 184 | 182 | 1.6E-61 | ||
| SUPERFAMILY | 16 | 179 | 164 | 2.49E-55 | ||
| Pfam | 28 | 188 | 161 | 2.6E-54 | ||
| SUPERFAMILY | 190 | 351 | 162 | 9.04E-25 | ||
| Gene3D | 191 | 352 | 162 | 4.0E-44 | ||
| CDD | 193 | 351 | 159 | 4.94966E-74 | – | |
| SMART | 231 | 349 | 119 | 2.1E-4 | ||
| Pfam | 234 | 351 | 118 | 1.5E-11 | ||
| ProSiteProfiles | 236 | 352 | 117 | 17.205 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. |
Expression pattern of LotjaGi6g1v0217100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…