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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019137
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.812s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0654410.1
LjNap Nck-associated protein 1 [Lotus japonicus] gi|221272640|emb|CAQ17051.1| chr4 10515756 10535319 -
2 domain predictions
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Lj4g3v0654410.2
n.a. n.a. chr4 10519050 10535319 -
2 domain predictions
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Lj5g3v0309130.1
n.a. Nck-associated protein 1 [Lotus japonicus] gi|221272640|emb|CAQ17051.1| chr5 3081149 3088492 -
2 domain predictions
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LotjaGi4g1v0083200.1
n.a. Nck-associated protein 1; TAIR: AT2G35110.2 transcription activator; Swiss-Prot: sp|Q5S2C4|NCKP1_ARATH Protein NAP1; TrEMBL-Plants: tr|B7ZGK2|B7ZGK2_LOTJA Nck-associated protein 1; Found in the gene: LotjaGi4g1v0083200 LjG1.1_chr4 10884191 10904038 -
3 domain predictions
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LotjaGi4g1v0083200.2
n.a. Nck-associated protein 1; TAIR: AT2G35110.2 transcription activator; Swiss-Prot: sp|Q5S2C4|NCKP1_ARATH Protein NAP1; TrEMBL-Plants: tr|B7ZGK2|B7ZGK2_LOTJA Nck-associated protein 1; Found in the gene: LotjaGi4g1v0083200 LjG1.1_chr4 10884663 10899837 -
3 domain predictions
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LotjaGi4g1v0083200.3
n.a. Nck-associated protein 1; TAIR: AT2G35110.2 transcription activator; Swiss-Prot: sp|Q5S2C4|NCKP1_ARATH Protein NAP1; TrEMBL-Plants: tr|B7ZGK2|B7ZGK2_LOTJA Nck-associated protein 1; Found in the gene: LotjaGi4g1v0083200 LjG1.1_chr4 10884663 10903396 -
3 domain predictions
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LotjaGi4g1v0083200.4
n.a. NAP1; TAIR: AT2G35110.1 transcription activator; Swiss-Prot: sp|Q5S2C4|NCKP1_ARATH Protein NAP1; TrEMBL-Plants: tr|B7ZGK5|B7ZGK5_LOTJA Nck-associated protein 1; Found in the gene: LotjaGi4g1v0083200 LjG1.1_chr4 10884663 10903510 -
3 domain predictions
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LotjaGi4g1v0083200.5
n.a. NAP1; TAIR: AT2G35110.1 transcription activator; Swiss-Prot: sp|Q5S2C4|NCKP1_ARATH Protein NAP1; TrEMBL-Plants: tr|B7ZGK5|B7ZGK5_LOTJA Nck-associated protein 1; Found in the gene: LotjaGi4g1v0083200 LjG1.1_chr4 10884663 10903513 -
3 domain predictions
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