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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020557
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.643s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1558980.1
n.a. Argininosuccinate lyase [Medicago truncatula] gi|357465245|ref|XP_003602904.1| chr1 18723673 18727564 +
2 domain predictions
1 GO term
Lj1g3v1558980.2
n.a. PREDICTED: argininosuccinate lyase-like [Glycine max] gi|356508027|ref|XP_003522764.1| chr1 18723673 18727564 +
2 domain predictions
1 GO term
Lj1g3v4139420.1
n.a. PREDICTED: adenylosuccinate lyase-like [Glycine max] gi|356501123|ref|XP_003519378.1| chr1 49003500 49007716 -
2 domain predictions
1 GO term
Lj5g3v1602390.1
n.a. PREDICTED: fumarate hydratase 1, mitochondrial-like [Glycine max] gi|356500262|ref|XP_003518952.1| chr5 23386868 23393659 +
2 domain predictions
1 GO term
LotjaGi1g1v0081500.1
n.a. Adenylosuccinate lyase; TAIR: AT1G36280.1 L-Aspartase-like family protein; Swiss-Prot: sp|P44797|PUR8_HAEIN Adenylosuccinate lyase; TrEMBL-Plants: tr|V7B898|V7B898_PHAVU Adenylosuccinate lyase; Found in the gene: LotjaGi1g1v0081500 LjG1.1_chr1 11784592 11789098 +
2 domain predictions
1 GO term
LotjaGi1g1v0346000.1
n.a. Argininosuccinate lyase; TAIR: AT5G10920.1 L-Aspartase-like family protein; Swiss-Prot: sp|Q9LEU8|ARLY_ARATH Argininosuccinate lyase, chloroplastic; TrEMBL-Plants: tr|I1JV68|I1JV68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346000 LjG1.1_chr1 81297433 81301464 +
2 domain predictions
1 GO term
LotjaGi5g1v0248000.1
n.a. Fumarate hydratase, class II; TAIR: AT2G47510.1 fumarase 1; Swiss-Prot: sp|P93033|FUM1_ARATH Fumarate hydratase 1, mitochondrial; TrEMBL-Plants: tr|V7BJH7|V7BJH7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0248000 LjG1.1_chr5 55676696 55683673 +
2 domain predictions
1 GO term