Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0346000 |
| Transcript ID | LotjaGi1g1v0346000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argininosuccinate lyase; TAIR: AT5G10920.1 L-Aspartase-like family protein; Swiss-Prot: sp|Q9LEU8|ARLY_ARATH Argininosuccinate lyase, chloroplastic; TrEMBL-Plants: tr|I1JV68|I1JV68_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0346000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:81297433..81301464) extracted from Lotus japonicus Gifu genome v1.2.
AATTTGTCTTGTAATTGCGATTATGGACACATTAATTTTTTTTAATGAATATATAACACTGTCTATGAGAGCGACCCCAT TGAGGTCAAAATAAATACGTTGGAAGCAGCCAAGTGACACGCAGAACGCACACTTCCATTTTCTCTGCAAAACCCTGAAG CCGGCGATGATGTCGCTAGGTTCTCTGTCGTCAACCTTCACTCTAGCGCCACCGTTCACTCGCCACCACCGCCACCACTC CTCCGCCGGCAGCAGAACTTCCTCATTCCCCACTCGCGCGAGAATCGAAAACGTCAGAATGGAACCCCGAGAGGTGCCAA ACCCCAAGCCCAAGGAGGAGAAACTGTGGGGTGGAAGGTTCAAGGAAGGAGTAACCGACGTCGTTGAGCGCTTCACCGAG TCGATCTCCTTCGATAAGGAGCTTTACAAGCAGGACATCACTGGAAGCAGAGCGCATGCTTCAATGCTCGCTCATCAGGT TCCATCACTTTGCTCATTCATTGCATGTTTGGATCAGTTTTTGTCTCTCTTTCTCTTTCTATCAGAATCAATTCCTGCAT GTAGAAATTAATCATAGCTATTGGCTTTTATTTCAGCTGAAATAGTTCTGTCACCTAGAAGCTACTCACGTCCTAGAATT GATTTTGCCTTTGGAATCAATTGTAACAAGATATCTAACATGCACTGAGAATTGATTTTGACTTCAAAGTCAATTGTGAA ATGATTTCCAAACATGCACTTGGTTCTACATTGACTAAGGGTGTGGTTGGGTAAACAGCTTAATTAAGTGCTTATTTTCA AAAGCTGATTTGATAAACTTATTGAAATAAACTGAAAATATGTTTAGATAAACAACTGATGGAAATAAGCTCAAAACAAC CATAAGCTATTGCCAAACAAGTCTGCAGGACAATCCTCACCAGTCACCATGGACTTAAAGCTTTCTGGTAGATTTAGGCT TTACACAAATTCTAAGATTTCTAACATGTACTCAGAATTGATTTTGACTTAAAAATAATTGTGAAATGATTTCCAAACAT GCACTAAGTTCTACATTGACCAAGTTTCTTGTTGAATAGAGATATTGCCTTACAAGTCTGTAAGACAATCCTCACTAGGA ACTTAAGCTTCTCTGGTAGAGTTAGGCTGAACGCAAATTTTAAGACACGATGTTGCTGTGCTTGCTGATACGATACATTG TTTTTTTATGTTATTGTTATAGGGATTGATTACGGTGACTGATAGGGATTCTATTCTGCAAGGCTTGGATGAGATTGAGA GGCGGATTGAAAACGGCGAGTTCAATTGGAGGACTGATAGGGAGGATGTGCACATGAACATTGAAGCTGCGCTCACTGAC ATGATTGGCGAGCCTGCTAAGAAGCTTCACACCTCTCGGAGCCGGAATGATCAGGTTGTGACGGACTTGCGCCTCTACTG CCGTGATGCCATTGATGAGATTCTTGCAAGCATGAAGCGACTTCAAGTGTCACTGATGACCCTAGCTTTGGACAATCAGG GCCTTATTGTTCCTGGTTATACTCATCTGCAGCGCGCACAGCCTGTTCTGCTCCAGCATCTTCTGCTAGCTTATGTTGAG GAGGTGTGCTGAAGATTTTACTAATGTTTGGTGAAATTTTACTTTATATGTTAATGTCAATAACAGGATAGGAGTTCAAA ATATGAACTGTGTACGAAAATTGTGTGCACTTATAATTCATGGAATTTTGATGAGATAAGAAGTTGGGATTGCATTCACA TCCTGTAAAATAGTAAAAAAATTCAAAATGTTTTGGTTCTTGCTTGTAATCAGTGCTACTCATAGATGTCAATTCCATTT ATTTAAGATGTTCTGGTATTCTGTAATAGGATTGGTTCTTTTAATTGTCTATGACTTATACTTTCATGCTTCAAGCCTGT ATTTTGTAGTCTATTATTGCTTGAAAAACTCATTTGACACTATTGTTCTTGTACAAAGTCCATACTGTTCACTTTACTTT ACTCACTTTATAAGCCTCTTTTGCAGATTGAGCGTGATGCTGGTCGTTTGATAGATTGTAGAGCTAGGATGAATTTCTGC CCCTTAGGGGCTTGTGCATTGGCTGGTACAGGGCTACCCATTGATCGATTCATGACTTCAGATGCCTTAGGATTTACAGC TCCCATGAGAAATAGGTGTGTAACTTTTCATTTGTGTGAAGTCAATCTATGCAGTTATGCATGTCTTGCTATTAGTGCGA AATAATTCAATGTTCATGTGAATCTATTTTTCCTTGCTAGCTGTTTATATTTTGTTTTGTGGTACAGTATAGATGCAGTA TCAGACAGAGATTTTATACTGGAGTTTCTTTCTGCTAATGCCATCACTGCAGTGCACCTTTCTCGGCTTGGTGAAGAATG GGTATTGTGGGCTTCAGAAGAATTTGGATTTATAACACCAAGTGACTCTGTTTCAACTGGAAGTAGTATAATGCCTCAGA AGAAGAATCCGGATCCAATGGAACTTGTCCGTGGGAAGTCTGCCAGAGTCATAGGAGACTTGGTTACTCTTCTCACACTG TGCAAAGGGCTTCCTCAAGCATATAATCGTGATTTGCAGGTAGGTGAAGGATAAAATAAATGTTTAATTTTTCTTGTTTT GCATGTTATCTTTATTTGTGTCTCCAATTCCTGCATTCACTTGTTTTGTTCGTGCACTACTTTTTTTTAGAGTAATTGTA ACAAAGTTCCTTTTTTGAAGTAGGAAGACAAAGAACCGGTATTTGATAGCGTCAAAACCATTTTGGGGATGCTTGAGGTA TCAGCAGAATTTGCACTGAACATTACTTTCAATCGTGGGAGAATACAAAAGGCTTTACCTGCTGGTTATCTTGATGCAAC CACACTTGCTGATTATCTTGTCAAGAAGGTAAGTCACATTTTTTATTGGCCTTCTCTCAATAAGCATTTGGTTTGTACTA AAACTATGGTCAATAGTTAGCAGTTGTAAATTACATGCACTGTTACTAATCTGTCTATTTTTAGGATTCAATATGCATGT CTTAACAATGGCGGCCTTGTAGAAAAATACTACACATGTGTACATCTAGGTCTCCACTTCTATTTTAACAGTATTATGTC TTAGGTTCTTGTCTCCCTTTTTCTGTCGTATGAAAAATGGAAACTATAACCTTACCGTTTAATAGGAAACATACATACGA TTTAGTTTGGCGGGCATTAAGAGGTGAGGGCAAATATAAACATGTTGCATTTTTTGACAGGTAGCAGTCAATTGCCAAGA CATATAAACATTTAAATATCATACTATTTCTGCACTTATTACTCATTGTGACTAGCTTACAACATCTCTGACTTGTTTCT AGGTTTTGAGTTGTGTTCATGTTTCTCCTTTTCAGTTTTACAAATTTGCCATATTCTTACCTATTTACTTTTGTACACAG GGAGTGCCATTCAGAACGTCTCATGATATTGCTGGAAAATCTGTTGCTTTATGTACATTGAAAGACTGCCAACTGCTGGA CTTGAGTCTCGATGAGCTGAGAAGTATAAGTCCAGTCTTTGAAAATGATGTGTATGAGTTTCTTGGAGTAGAAAATTCGA TCCAAAAATTCATTTCTTATGGTTCCACCGGGTCAGCATGTGTAGCCGAGCAAATTGATTACTGGATAAAAAAACTTGAA CTGCAGTGAAGATTACCTAATTGTCATGAAACTCTCAGCATGCTGGGGAAGCCATTTCTTAAGCTTAGAATAATAGGCAT AGCCCTCTGCTTCCCAAATATCCTGCGGCATGTTGTTCTAGAATAACAAGGATGATATCTTTAAATACTTGCTAGTTATA TGCCAAATTAGTTATGGTTGCTGAATAGGTGGTTTCAGAATCAAAGGTGACATGCCTTAAAGTTTTGAGCTTGTTAGCTT GTTGCATATTGTATGTCGGATGAGAATTTCAGCATGCACCATGCTGTATGAATTTATATCGCTTATGATGAAATCCGGTC TTGGTTGGTTCTGATACCTTGATTAAAAAAAG
CDS sequence (LotjaGi1g1v0346000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCGCTAGGTTCTCTGTCGTCAACCTTCACTCTAGCGCCACCGTTCACTCGCCACCACCGCCACCACTCCTCCGC CGGCAGCAGAACTTCCTCATTCCCCACTCGCGCGAGAATCGAAAACGTCAGAATGGAACCCCGAGAGGTGCCAAACCCCA AGCCCAAGGAGGAGAAACTGTGGGGTGGAAGGTTCAAGGAAGGAGTAACCGACGTCGTTGAGCGCTTCACCGAGTCGATC TCCTTCGATAAGGAGCTTTACAAGCAGGACATCACTGGAAGCAGAGCGCATGCTTCAATGCTCGCTCATCAGGGATTGAT TACGGTGACTGATAGGGATTCTATTCTGCAAGGCTTGGATGAGATTGAGAGGCGGATTGAAAACGGCGAGTTCAATTGGA GGACTGATAGGGAGGATGTGCACATGAACATTGAAGCTGCGCTCACTGACATGATTGGCGAGCCTGCTAAGAAGCTTCAC ACCTCTCGGAGCCGGAATGATCAGGTTGTGACGGACTTGCGCCTCTACTGCCGTGATGCCATTGATGAGATTCTTGCAAG CATGAAGCGACTTCAAGTGTCACTGATGACCCTAGCTTTGGACAATCAGGGCCTTATTGTTCCTGGTTATACTCATCTGC AGCGCGCACAGCCTGTTCTGCTCCAGCATCTTCTGCTAGCTTATGTTGAGGAGATTGAGCGTGATGCTGGTCGTTTGATA GATTGTAGAGCTAGGATGAATTTCTGCCCCTTAGGGGCTTGTGCATTGGCTGGTACAGGGCTACCCATTGATCGATTCAT GACTTCAGATGCCTTAGGATTTACAGCTCCCATGAGAAATAGTATAGATGCAGTATCAGACAGAGATTTTATACTGGAGT TTCTTTCTGCTAATGCCATCACTGCAGTGCACCTTTCTCGGCTTGGTGAAGAATGGGTATTGTGGGCTTCAGAAGAATTT GGATTTATAACACCAAGTGACTCTGTTTCAACTGGAAGTAGTATAATGCCTCAGAAGAAGAATCCGGATCCAATGGAACT TGTCCGTGGGAAGTCTGCCAGAGTCATAGGAGACTTGGTTACTCTTCTCACACTGTGCAAAGGGCTTCCTCAAGCATATA ATCGTGATTTGCAGGAAGACAAAGAACCGGTATTTGATAGCGTCAAAACCATTTTGGGGATGCTTGAGGTATCAGCAGAA TTTGCACTGAACATTACTTTCAATCGTGGGAGAATACAAAAGGCTTTACCTGCTGGTTATCTTGATGCAACCACACTTGC TGATTATCTTGTCAAGAAGGGAGTGCCATTCAGAACGTCTCATGATATTGCTGGAAAATCTGTTGCTTTATGTACATTGA AAGACTGCCAACTGCTGGACTTGAGTCTCGATGAGCTGAGAAGTATAAGTCCAGTCTTTGAAAATGATGTGTATGAGTTT CTTGGAGTAGAAAATTCGATCCAAAAATTCATTTCTTATGGTTCCACCGGGTCAGCATGTGTAGCCGAGCAAATTGATTA CTGGATAAAAAAACTTGAACTGCAGTGA
Protein sequence (LotjaGi1g1v0346000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSLGSLSSTFTLAPPFTRHHRHHSSAGSRTSSFPTRARIENVRMEPREVPNPKPKEEKLWGGRFKEGVTDVVERFTESI SFDKELYKQDITGSRAHASMLAHQGLITVTDRDSILQGLDEIERRIENGEFNWRTDREDVHMNIEAALTDMIGEPAKKLH TSRSRNDQVVTDLRLYCRDAIDEILASMKRLQVSLMTLALDNQGLIVPGYTHLQRAQPVLLQHLLLAYVEEIERDAGRLI DCRARMNFCPLGACALAGTGLPIDRFMTSDALGFTAPMRNSIDAVSDRDFILEFLSANAITAVHLSRLGEEWVLWASEEF GFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPQAYNRDLQEDKEPVFDSVKTILGMLEVSAE FALNITFNRGRIQKALPAGYLDATTLADYLVKKGVPFRTSHDIAGKSVALCTLKDCQLLDLSLDELRSISPVFENDVYEF LGVENSIQKFISYGSTGSACVAEQIDYWIKKLELQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| MobiDBLite | 13 | 59 | 47 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 515 | 496 | - | – | |
| PANTHER | 35 | 513 | 479 | 4.6E-265 | ||
| MobiDBLite | 41 | 59 | 19 | - | – | |
| Hamap | 59 | 510 | 452 | 39.761 | ||
| SUPERFAMILY | 60 | 512 | 453 | 5.03E-136 | ||
| TIGRFAM | 60 | 508 | 449 | 4.7E-174 | ||
| Pfam | 63 | 357 | 295 | 8.3E-71 | ||
| CDD | 79 | 512 | 434 | 0.0 | ||
| Gene3D | 82 | 286 | 205 | 2.9E-179 | ||
| PRINTS | 158 | 180 | 23 | 3.1E-60 | – | |
| PRINTS | 159 | 177 | 19 | 6.1E-24 | ||
| Gene3D | 176 | 505 | 330 | 2.9E-179 | – | |
| PRINTS | 199 | 219 | 21 | 3.1E-60 | – | |
| PRINTS | 204 | 222 | 19 | 6.1E-24 | ||
| PRINTS | 250 | 266 | 17 | 3.1E-60 | – | |
| PRINTS | 288 | 315 | 28 | 6.1E-24 | ||
| PRINTS | 288 | 312 | 25 | 3.1E-60 | – | |
| ProSitePatterns | 332 | 341 | 10 | - | ||
| PRINTS | 332 | 348 | 17 | 3.1E-60 | – | |
| PRINTS | 332 | 348 | 17 | 6.1E-24 | ||
| PRINTS | 367 | 386 | 20 | 3.1E-60 | – | |
| Gene3D | 417 | 489 | 73 | 2.9E-179 | – | |
| Pfam | 420 | 487 | 68 | 8.2E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Argininosuccinate lyase activity | Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine. | ||
| Biological process | Arginine biosynthetic process via ornithine | The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine. |
Expression pattern of LotjaGi1g1v0346000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…