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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020616
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We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.124s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0197249.1
n.a. PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Glycine max] gi|356575164|ref|XP_003555712.1| chr0 96189682 96191792 +
2 domain predictions
1 GO term
Lj0g3v0197249.2
n.a. PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Glycine max] gi|356575164|ref|XP_003555712.1| chr0 96189751 96191792 +
2 domain predictions
1 GO term
Lj0g3v0259119.1
n.a. PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cicer arietinum] gi|502146749|ref|XP_004506590.1| chr0 134611772 134615912 -
2 domain predictions
1 GO term
Lj2g3v3339520.1
n.a. PREDICTED: acetyl-CoA acetyltransferase, cytosolic 1-like [Glycine max] gi|356554441|ref|XP_003545555.1| chr2 42750077 42755759 -
2 domain predictions
1 GO term
Lj4g3v0099340.1
n.a. PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2 [Glycine max] gi|356522083|ref|XP_003529679.1| chr4 887447 890455 -
2 domain predictions
1 GO term
Lj4g3v0099340.2
n.a. PREDICTED: probable acetyl-CoA acetyltransferase, cytosolic 2 [Glycine max] gi|356522083|ref|XP_003529679.1| chr4 887447 892061 -
2 domain predictions
1 GO term
Lj6g3v0214790.1
n.a. acetyl-CoA C-acetyltransferase [Hevea brasiliensis] gi|164604960|dbj|BAF98276.1| chr6 2195639 2198346 +
2 domain predictions
1 GO term
Lj6g3v0214790.2
n.a. acetyl-CoA C-acetyltransferase [Hevea brasiliensis] gi|164604960|dbj|BAF98276.1| chr6 2195639 2199845 +
2 domain predictions
1 GO term
Lj6g3v0214790.3
n.a. acetyl-CoA C-acetyltransferase [Hevea brasiliensis] gi|164604960|dbj|BAF98276.1| chr6 2195639 2199845 +
2 domain predictions
1 GO term
LotjaGi1g1v0005300.1
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT5G48230.2 acetoacetyl-CoA thiolase 2; Swiss-Prot: sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1; TrEMBL-Plants: tr|A0A0R0GDY6|A0A0R0GDY6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0005300 LjG1.1_chr1 850891 863714 +
2 domain predictions
1 GO term
LotjaGi1g1v0005300.2
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT5G48230.2 acetoacetyl-CoA thiolase 2; Swiss-Prot: sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1; TrEMBL-Plants: tr|A0A0R0GDY6|A0A0R0GDY6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0005300 LjG1.1_chr1 851549 855107 +
2 domain predictions
1 GO term
LotjaGi1g1v0005300.3
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT5G48230.1 acetoacetyl-CoA thiolase 2; Swiss-Prot: sp|Q8S4Y1|THIC1_ARATH Acetyl-CoA acetyltransferase, cytosolic 1; TrEMBL-Plants: tr|M5WS77|M5WS77_PRUPE Uncharacterized protein; Found in the gene: LotjaGi1g1v0005300 LjG1.1_chr1 851589 855107 +
2 domain predictions
1 GO term
LotjaGi3g1v0232400.1
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3; Swiss-Prot: sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal; TrEMBL-Plants: tr|A0A151TF80|A0A151TF80_CAJCA 3-ketoacyl-CoA thiolase 2, peroxisomal; Found in the gene: LotjaGi3g1v0232400 LjG1.1_chr3 36664193 36670111 -
2 domain predictions
1 GO term
LotjaGi3g1v0232400.2
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3; Swiss-Prot: sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal; TrEMBL-Plants: tr|A0A151TF80|A0A151TF80_CAJCA 3-ketoacyl-CoA thiolase 2, peroxisomal; Found in the gene: LotjaGi3g1v0232400 LjG1.1_chr3 36666614 36669863 -
2 domain predictions
1 GO term
LotjaGi4g1v0005700.1
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT5G47720.2 Thiolase family protein; Swiss-Prot: sp|Q9FIK7|THIC2_ARATH Probable acetyl-CoA acetyltransferase, cytosolic 2; TrEMBL-Plants: tr|G7ZZU7|G7ZZU7_MEDTR Peroxisomal acetoacetyl-coenzyme A thiolase; Found in the gene: LotjaGi4g1v0005700 LjG1.1_chr4 887306 894865 -
2 domain predictions
1 GO term
LotjaGi4g1v0005700.2
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT5G47720.2 Thiolase family protein; Swiss-Prot: sp|Q9FIK7|THIC2_ARATH Probable acetyl-CoA acetyltransferase, cytosolic 2; TrEMBL-Plants: tr|G7ZZU7|G7ZZU7_MEDTR Peroxisomal acetoacetyl-coenzyme A thiolase; Found in the gene: LotjaGi4g1v0005700 LjG1.1_chr4 887916 894573 -
2 domain predictions
1 GO term
LotjaGi6g1v0014400.1
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3; Swiss-Prot: sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal; TrEMBL-Plants: tr|A0A151S7N8|A0A151S7N8_CAJCA 3-ketoacyl-CoA thiolase 2, peroxisomal; Found in the gene: LotjaGi6g1v0014400 LjG1.1_chr6 2607651 2613075 +
2 domain predictions
1 GO term
LotjaGi6g1v0014400.2
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3; Swiss-Prot: sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal; TrEMBL-Plants: tr|A0A151S7N8|A0A151S7N8_CAJCA 3-ketoacyl-CoA thiolase 2, peroxisomal; Found in the gene: LotjaGi6g1v0014400 LjG1.1_chr6 2608407 2612209 +
2 domain predictions
1 GO term
LotjaGi6g1v0014400.3
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3; Swiss-Prot: sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal; TrEMBL-Plants: tr|A0A151S7N8|A0A151S7N8_CAJCA 3-ketoacyl-CoA thiolase 2, peroxisomal; Found in the gene: LotjaGi6g1v0014400 LjG1.1_chr6 2608460 2611343 +
2 domain predictions
1 GO term
LotjaGi6g1v0024400.1
n.a. 3-ketoacyl-CoA thiolase; TAIR: AT5G47720.1 Thiolase family protein; Swiss-Prot: sp|Q9FIK7|THIC2_ARATH Probable acetyl-CoA acetyltransferase, cytosolic 2; TrEMBL-Plants: tr|M5WS77|M5WS77_PRUPE Uncharacterized protein; Found in the gene: LotjaGi6g1v0024400 LjG1.1_chr6 4452439 4459484 +
2 domain predictions
1 GO term