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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0232400 |
| Transcript ID | LotjaGi3g1v0232400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-ketoacyl-CoA thiolase; TAIR: AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3; Swiss-Prot: sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal; TrEMBL-Plants: tr|A0A151TF80|A0A151TF80_CAJCA 3-ketoacyl-CoA thiolase 2, peroxisomal; Found in the gene: LotjaGi3g1v0232400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:36664193..36670111) extracted from Lotus japonicus Gifu genome v1.2.
TACATTCTTATATTTTCATTGCAATAAAGATTTTTGTTCCCAATGAAAACTTTCAACGAAACCGTTTATTGTATTGTGGT TGACTGGACTGTGAAGGAACTTGCTAGTCCATTTCCTCAAACTTTCATGTCATTCTCTCTTCTCTTATTCACTATATATA TATTTAGTGACAGTTCCTTTGCAAAAATTCAACAACATTCACAGCACACACAGACAGAACCATAGGCAAAGACAGAGGTG GTCAAAGCATGGAGAAAGCAATTCAAAGACAGAGAGTCCTCCTTGAACATCTTCAACCCAGTTCTTCAATTTCATCTTTT TCACCTCAATCCACTGATCTCACTGTAAGTTTGCATATTCATAATCATACCATTTCAATCTTTCACCTGATTCCTCTGTT CTGTTGTGCATTTTGATTATAAGAGTGTTTTCTATTTGTTTTCTCTGTTTTATAGTCGGTGTTTTTAATTTGTAGGCTTC AGTCTGTGCTGCTGAGAATTCTTTGCAGGGAAAAACAAGTGGATCTGAAGATGATGTGGTCATTGTAGCGTAAGTTCGTT AATATCATAGCAATATGAATATGAATCTGCTGTGTGTTTGTTTTTCTAATTTATTATTTTTGTTGATGACTATAAACTCT GATTTGGATTTCATTGCTATGATAACCAGAGCATATCGTACTGCCATCTGCAAAGCAAAGCGTGGAGGCTTCAAGGACAC CCTTCCAGATGACCTACTTGCATCTGTTCTGAAGGTAAACCCTTTGACTATGTGCTTGGATTTCATGGTTTAGTGAAATG TAATAGAATGAGGAGTTGACTCTCTAAAATCAAGAGTAGACTCTAGAGAAATTTTTAAATTTTAATGATATTATGGTTTT AAATCTATGTCCATGACCGCGATTGTGGCCGTGATATCAAGACTGTTTCACGACCGCAATTGTTGCGGTATTAGGATTAT TTGTCCCTAATTTTTTACAATATCGAATATCGGAATGATATTGGGGGCAAACTTCGTGCTACAGAGCTCCTGCTATGCGC GAGGTTCAGGGAGGGGTCGGATCCAATTTGTAGATCTAATGTAGGCAACCTTACCTTGCACTTTTATAAGAGGCTGATTC CACTTCTCGAAGATGTGACCGCAAAGTCACATAACAACTACTTTACCGTGAATATTGGAATGATATTACCTTGAATAAAA TATTGCTTGTATGATAAATTATGAAGTTATTAAAATATAATGGTTGCTTAAAAAATTACTCTAGAGACCGAATCACTGTA GTCTGTAGTGATTCATGTTTGGAGCTTATCAACCTTGAAATGGTTTTATTCACAATTGTCTGGTTTCTTTCTTTTTCATT TCTAAGTTTCTTTTCCCCTTTCCATAGTTTCTCATTCACCAGTTTCATGTAGGCTGTGATAGAGAAAACAAATGTGAACC CAAGTGAAGTAGGAGACATAATTGTTGGCACAGTGCTAGCACCAGGATCAGAAAGAGCAATTGAGTGCAGAATGGCAGCT TTCTATGCGGGTTTCCCAGGTAAATTTCAAGGTCTTTATTGACCATGACCAAAATCATGATTTCATTTGATTTAATGCTA CAAGTTAGCATGTGTTTTACTAGGCTTTTAGCTCAATTTCAATTACATGACTATCTCCTTCAATTTTCAATCAGAGACGG TGCCGCTCCGAACTGTCAATAGGCAATGTTCATCTGGACTTCAAGCTGTTGCTGATGTTGCTGCGTACATAAAAGCTGGA TTCTATGACATTGGTAAAAATGAATCTATTCTCTGTTTAAATGCCATGGACTTTTGTTTTTTTTTTTTTTTTTTTTTTTG GCCTAATCTTCTTGTTATTTGATGAAGGCATTGGGGCTGGATTGGAGTGTATGACACAAGATAATATTTCAAGGCCGACT CGTAAAGCTAGCTCAAATGTACGTTGAAGCTGTAATTTTTGAGCTTCACATTTTCCTTTCAAACGTAGTTTATTCAGTTT GGCTTTTCACTGTTTTAACAGGTAGAGGCCTTTGCGCAAGCCCGGGATTGTCTTCTTCCTATGGGAATCACTTCTGAGAA TGTTGCACAGCGTTATGGTGTGACAAGACAAGAGCAAGACCAGGCTGCTGTAAGTCTGACATTGTATTTGTAGCATGTTT GGATCACCTTCTTTTTGTTTAGAATCAATTCTGAAACCCTTATACTACTCACGGAAGCTTTTCCCCCGAGTTGATTCTGG CTTTAGAATTAATCGTAGGGAGATTTTCAAACATACAATTAATATGCTAAGAATCTATGAAAAGATTATCCAGATGGGTA AAGTCTTTTAATTTGTGTTTATTAGGTTGAGTCTCACAAGCGTGCTGCAGCTGCAATAGCTTCTGGTAAATTCAAAGAAG AAATAATTCCAGTTTCTACTAAGGTCAGTGTCAACTGCTAAGATGATTTTCCTCTTAATATTTGTAATATCATATTACTA ATGATTTATTTCAAAATTCAAAAGATTGTGGACCCTAAAACTGGAGAGGTGAAGCAAATTGTCGTTTCTGTTGATGATGG TATCCGACCGAACACAAATGTGAATGATCTGGCAAAGCTGAAGCCTGCATTCAAGAAGGATGGATCCACAACAGCAGGTA CTCAAGAAATCTGTTTTTTTGTTAATCTTGTTACTCTGGGAAAACTCTTGTCTAATCAATCTTTTGTTAACTTTTTTCAC TCTTTTTAATATTAGGGAATGCTAGCCAAGTTAGTGATGGTGCTGCTGCAGTTCTCCTTATGAAGAGAAGAGTGGCTGTG CAAAAGGGACTTCCTATTCTTGGAATCTTCAGGTACACCATAATGATGTATAATCAAGCTAATTAGTTTGAGAAACATTA CTAGTTGTATGTAGGTAATAGTTACTTTATCTGATGAAGTTTCTGTAATAGAGGATCTTTGAAGCTTGCAACCATGTCCT TCTTTTTATATATCTTTAAATTTAAAATTTAAATTCATGGAACAAGTGAATTCAATTTTGCAGGAGTTTTGCTGCTGTTG GAGTAGATCCTTCTGTCATGGGTGTTGGTCCGGCTTTTGCTATTCCGGCCGCTGTGAAATCTGCAGGTCTTGAACTTGGT AACATTGACTTGTTTGAAATCAATGAGGTAAAGGTTTTAGCTGTTGTTATGATAACTAGCAACAACTTTTTGGTTTACGT GGACAAGTGGAACTTGAATAAATATTGTACTAAGCGCTTAGCGATACATTGGTCTTGTGTAGGCATTTGCGTCGCAGTTT GTTTATTCCTGCAAGAAATTGGGACTTGATACCAGAAAGGTCAATGTCAATGGTGGTGCCATTGCTCTTGGGCATCCTTT GGGCGCTACAGGTGCACGCTGTGTTGCAACTTTGCTGAATGAGATGAAGCGTCGGGGCAAGGACTGTCGCTTTGGTGCAA TCTCAATGTGCATAGGTGATTTCTTCTTTTGGTCTCTCTCTCTATAAATAACATGTAAAGCATATATATAATCATTTTTT AGCTGAATTAAAAATTTGGTTTTAGTGACAAATGCATATCATGTGGGAGGCAAATTAATTGTTTCTATTCTTCTAAGCTG GCATTCAAACTTAGTGGCTTGCTTAATAAGTTAGCATAATTATCTCCAGAAAAGAAGACCTGTTTCAGAATAGTAAAATG AAAAGTAGCATAGGAAAAGAACTTCAAAAAAAAAAAGAACTTAATGGCATTGGAGGGTCTTTTCTAGAACCCAGATGAGT CCTAAATTCTCAAGAGTACCCCTGACTGCGGTAAATTTAGGAATCTCTGGCGGTTTATGTTATTTTTATCTAGCATGTAA TGGACTAAAGCAGGACTTCATACTTACACTTGAATTCCTAACAAATTTAGTCCATTCTTTCTAATAATGAACCACCTTGC TTTGCTTTAAAGAGATTTGGTCCACAGAGGAGAAAGTTAAACAGATGACTAATACATGCATGCTACGGCTTAAGTGTTAT TCATATCCTTGCTTAATAACATCATTGAAATGTGCATCATTTCAGGGTCTGGTATGGGAGCTGCTGCTGTATTTGAAAGG GGAGACTGTTGAAAATTTATACAAGTTTATAATGGTTAGAAAGAAGAAGTAACACAATCTTGTTTCAAAGGATGCTTGAT CTATCATTTGAAGTGTCTCTAGTTTGAATTCAGTTGTGATCTGAAAGTTACAAAAAGGTGGATGTGAAATTTTATTATTT ACCAATTGAAAACAATAAATGTATCCAAAAAAGAATTATTATAATCATGATTATTACCATGATGATAGAAGCTGTTTGTA CTACATGCAACTGCTCTGTTTGAATATGCTGATGAGTAAAGACCGAGAGAAGGAAAGCAGAAATTTTGTACTACATCAAA TTCATGAACCCAAAATCCATTTCTCACTTACTTTTTTGGGTTGAATGTGTTTAGGTCCCTGTAAAATTTGGGAAAATTGG ATTTTGTCCCTCCAAAAGTTTTTCATAGATTTTAGTATTCGTTAATGAAATAAATTAGTCTCTATTGTTAGTCTTCCTCT GTTAAGTGATAATGCGGGTTATGAAATCCAAGCAATGCCATGTAGGCTTGTAAGCTGACATAGCAGTTTCACTCCGTAGC TATTGAAATATTACAAATAGTTGCAACAGTCAATTTGTGGGAGTAACAATATTGTTTAAGTCCTACGCTAATGAGAATGA GGATTTATAATTAGGGTAATATTTACTAGTACAGGATAATATATGTTATACAACAATATCATATACACACTTGATTCTGC CCATGTTTGTTACAGCCCTACGTATATGTACATGTTAAAGGGACATGCTTCGAGGATATGCTATATGCTCAACCCTAATC CTGATTTCTCTTCAGCCATGTTGTCATGAACGTCGGAGGGCCTTGCAGGTACCAACCTCAACACCCACATGATTGTTAGA TATGAGAACAAGGAGGCCCTTCCACAGAGGAGCATCCCAGACTTACCATCCTATAACTTTGTTGTCCCATGTTCAAGTTT GGTTCTCCCTTACTCGAACATTGGCTACATCTATGGAGAAACGATAAAGTGATTCCCGTTCATCTTTATACAACGAAAAC AAGAAGTCAACAGAGAAATCGTGCCCCTTCACAGGAAGGGAAACTTGCTACTATTTGTGAAGAACACGTTGATTCAAGCG ATGAGTGTTAATCAAGAAAAGGACGCCAAAGTCCTTGCTATTTGATAAGTGTCATTTTTATGTATATTTGAATATTATTT TAGGCACGTTTTTTACTTGTATACTCGCATTGCATCATTGTTCATTTTATCTCCTAAAAGAGTTAATACAGTAATGTAAA TGCCATTAATTTCATGTTCTAACTTAGAGTTTTGATGTAGGAAAAAAAATTAAAGGAAGATCCAAGTTGAAATGAAGATA TGAAAAAGGCTTGGCGCTTAGCACCAGGAAATGACGCTTAGCACCATTTTGACAGTGATCAAGAAAAGAGCATGGCGCTT AGTGCCAAAGGGCGGTAGAGAAAACCCAAAAGTGAAGAAACAAGGGCGCTAAGGGCCAGAAAAGGGCGGCTAAGCGCCAT TTTGATAGCTCTTATTCCTATAAATGACCAAAACTTGTATTTTTGTGTATCTCTCCATTTCTCTTCGATTTTACTCTCAT TTTGGCACCAGAACAGAGCAATGGATTCTAGACTTCATGGAAGAGAGGTCCTTGTGCATGGATTGATGGAGTGCAGCTTC GGAGTGTGGTGGAAACCATGAGAGGATCGTGACAACCTCTTGGAGGCCATGTATGACTTGTGAAGGTTTATATGGTCGTG GATCAGTCGTCATTCTTATGGGTTTCATCTCTTCTTTCCTTATTCCTTTCTATTTTGGTATCTAGGATATTATAGCTTA
CDS sequence (LotjaGi3g1v0232400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAAGCAATTCAAAGACAGAGAGTCCTCCTTGAACATCTTCAACCCAGTTCTTCAATTTCATCTTTTTCACCTCA ATCCACTGATCTCACTGCTTCAGTCTGTGCTGCTGAGAATTCTTTGCAGGGAAAAACAAGTGGATCTGAAGATGATGTGG TCATTGTAGCAGCATATCGTACTGCCATCTGCAAAGCAAAGCGTGGAGGCTTCAAGGACACCCTTCCAGATGACCTACTT GCATCTGTTCTGAAGGCTGTGATAGAGAAAACAAATGTGAACCCAAGTGAAGTAGGAGACATAATTGTTGGCACAGTGCT AGCACCAGGATCAGAAAGAGCAATTGAGTGCAGAATGGCAGCTTTCTATGCGGGTTTCCCAGAGACGGTGCCGCTCCGAA CTGTCAATAGGCAATGTTCATCTGGACTTCAAGCTGTTGCTGATGTTGCTGCGTACATAAAAGCTGGATTCTATGACATT GGCATTGGGGCTGGATTGGAGTGTATGACACAAGATAATATTTCAAGGCCGACTCGTAAAGCTAGCTCAAATGTAGAGGC CTTTGCGCAAGCCCGGGATTGTCTTCTTCCTATGGGAATCACTTCTGAGAATGTTGCACAGCGTTATGGTGTGACAAGAC AAGAGCAAGACCAGGCTGCTGTTGAGTCTCACAAGCGTGCTGCAGCTGCAATAGCTTCTGGTAAATTCAAAGAAGAAATA ATTCCAGTTTCTACTAAGATTGTGGACCCTAAAACTGGAGAGGTGAAGCAAATTGTCGTTTCTGTTGATGATGGTATCCG ACCGAACACAAATGTGAATGATCTGGCAAAGCTGAAGCCTGCATTCAAGAAGGATGGATCCACAACAGCAGGGAATGCTA GCCAAGTTAGTGATGGTGCTGCTGCAGTTCTCCTTATGAAGAGAAGAGTGGCTGTGCAAAAGGGACTTCCTATTCTTGGA ATCTTCAGGAGTTTTGCTGCTGTTGGAGTAGATCCTTCTGTCATGGGTGTTGGTCCGGCTTTTGCTATTCCGGCCGCTGT GAAATCTGCAGGTCTTGAACTTGGTAACATTGACTTGTTTGAAATCAATGAGGCATTTGCGTCGCAGTTTGTTTATTCCT GCAAGAAATTGGGACTTGATACCAGAAAGGTCAATGTCAATGGTGGTGCCATTGCTCTTGGGCATCCTTTGGGCGCTACA GGTGCACGCTGTGTTGCAACTTTGCTGAATGAGATGAAGCGTCGGGGCAAGGACTGTCGCTTTGGTGCAATCTCAATGTG CATAGGGTCTGGTATGGGAGCTGCTGCTGTATTTGAAAGGGGAGACTGTTGA
Protein sequence (LotjaGi3g1v0232400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKAIQRQRVLLEHLQPSSSISSFSPQSTDLTASVCAAENSLQGKTSGSEDDVVIVAAYRTAICKAKRGGFKDTLPDDLL ASVLKAVIEKTNVNPSEVGDIIVGTVLAPGSERAIECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAAYIKAGFYDI GIGAGLECMTQDNISRPTRKASSNVEAFAQARDCLLPMGITSENVAQRYGVTRQEQDQAAVESHKRAAAAIASGKFKEEI IPVSTKIVDPKTGEVKQIVVSVDDGIRPNTNVNDLAKLKPAFKKDGSTTAGNASQVSDGAAAVLLMKRRVAVQKGLPILG IFRSFAAVGVDPSVMGVGPAFAIPAAVKSAGLELGNIDLFEINEAFASQFVYSCKKLGLDTRKVNVNGGAIALGHPLGAT GARCVATLLNEMKRRGKDCRFGAISMCIGSGMGAAAVFERGDC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 443 | 443 | 8.9E-245 | – | |
| PANTHER | 1 | 443 | 443 | 8.9E-245 | – | |
| Phobius | 1 | 420 | 420 | - | – | |
| SUPERFAMILY | 48 | 311 | 264 | 5.09E-66 | ||
| PIRSF | 48 | 442 | 395 | 2.4E-122 | ||
| Gene3D | 53 | 326 | 274 | 9.5E-147 | ||
| Pfam | 53 | 308 | 256 | 2.7E-80 | ||
| CDD | 54 | 440 | 387 | 0.0 | ||
| TIGRFAM | 55 | 439 | 385 | 1.5E-134 | ||
| ProSitePatterns | 135 | 153 | 19 | - | ||
| Gene3D | 190 | 436 | 247 | 9.5E-147 | ||
| Pfam | 318 | 440 | 123 | 1.4E-46 | ||
| SUPERFAMILY | 319 | 440 | 122 | 3.2E-38 | ||
| ProSitePatterns | 385 | 401 | 17 | - | ||
| Phobius | 421 | 438 | 18 | - | – | |
| ProSitePatterns | 422 | 435 | 14 | - | ||
| Phobius | 439 | 443 | 5 | - | – | |
| Coils | 443 | 443 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi3g1v0232400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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