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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020843
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We have found 87 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.622s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0023479.1
n.a. PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like isoform X1 [Cicer arietinum] gi|502082078|ref|XP_004487059.1| chr0 9375308 9378821 -
2 domain predictions
1 GO term
Lj0g3v0210839.1
n.a. PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Glycine max] gi|356544066|ref|XP_003540476.1| chr0 106078139 106083805 +
2 domain predictions
1 GO term
Lj0g3v0228979.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Cicer arietinum] gi|502086897|ref|XP_004488361.1| chr0 118462949 118465431 -
2 domain predictions
1 GO term
Lj0g3v0288919.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Cicer arietinum] gi|502086897|ref|XP_004488361.1| chr0 150090516 150092428 +
2 domain predictions
1 GO term
Lj0g3v0339299.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max] gi|356526809|ref|XP_003532009.1| chr0 177718250 177721557 -
2 domain predictions
1 GO term
Lj1g3v1112850.1
n.a. PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max] gi|356509112|ref|XP_003523296.1| chr1 13927776 13931476 +
2 domain predictions
1 GO term
Lj1g3v3328890.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X1 [Cicer arietinum] gi|502090104|ref|XP_004489122.1| chr1 37377704 37382459 +
2 domain predictions
1 GO term
Lj1g3v3328890.2
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X1 [Cicer arietinum] gi|502090104|ref|XP_004489122.1| chr1 37379287 37382459 +
2 domain predictions
1 GO term
Lj1g3v3580590.2
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357505171|ref|XP_003622874.1| chr1 41109997 41114047 +
2 domain predictions
1 GO term
Lj1g3v3641820.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr1 41841861 41843762 +
2 domain predictions
1 GO term
Lj1g3v3641840.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr1 41846105 41849379 +
2 domain predictions
1 GO term
Lj1g3v3979340.1
n.a. Alcohol dehydrogenase class-3 [Medicago truncatula] gi|357487763|ref|XP_003614169.1| chr1 47284995 47287627 -
2 domain predictions
1 GO term
Lj2g3v1014110.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502090613|ref|XP_004489284.1| chr2 15469697 15471403 +
2 domain predictions
1 GO term
Lj3g3v0463530.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr3 5302913 5305882 +
2 domain predictions
1 GO term
Lj3g3v0615870.1
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470795|ref|XP_003605682.1| chr3 6634693 6638828 -
2 domain predictions
1 GO term
Lj3g3v0642510.1
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max] gi|356504476|ref|XP_003521022.1| chr3 6922458 6925489 +
2 domain predictions
1 GO term
Lj3g3v0642510.2
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max] gi|356504476|ref|XP_003521022.1| chr3 6922458 6941029 +
2 domain predictions
1 GO term
Lj3g3v0642510.3
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Glycine max] gi|356504480|ref|XP_003521024.1| chr3 6937549 6941029 +
2 domain predictions
1 GO term
Lj3g3v0642610.2
n.a. PREDICTED: NADP-dependent alkenal double bond reductase P1-like [Cicer arietinum] gi|502155748|ref|XP_004510178.1| chr3 6988027 6998336 -
2 domain predictions
1 GO term
Lj3g3v2722620.1
n.a. Quinone oxidoreductase-like protein [Medicago truncatula] gi|357514739|ref|XP_003627658.1| chr3 33491598 33493572 -
2 domain predictions
1 GO term
Lj3g3v3639170.1
n.a. alcohol dehydrogenase-like [Glycine max] gi|367460047|ref|NP_001238395.2| chr3 43977518 43993037 -
2 domain predictions
1 GO term
Lj3g3v3639170.3
n.a. alcohol dehydrogenase-like [Glycine max] gi|367460047|ref|NP_001238395.2| chr3 43990407 43993006 -
2 domain predictions
1 GO term
Lj3g3v3753340.2
n.a. Quinone-oxidoreductase-like protein [Medicago truncatula] gi|357470785|ref|XP_003605677.1| chr3 45475577 45477896 +
2 domain predictions
1 GO term
Lj4g3v0408340.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max] gi|356554814|ref|XP_003545737.1| chr4 5131059 5133978 -
2 domain predictions
1 GO term
Lj4g3v0585740.1
n.a. 15-hydroxyprostaglandin dehydrogenase [Medicago truncatula] gi|357475423|ref|XP_003607997.1| chr4 9241274 9257776 -
2 domain predictions
1 GO term
Lj4g3v2775530.1
n.a. RecName: Full=Probable mannitol dehydrogenase; AltName: Full=NAD-dependent mannitol dehydrogenasegi|17028156|gb|AAL34328.1|L46856_1 cinnamyl-alcohol dehydrogenase [Medicago sativa] gi|10720088|sp|O82515.1|MTDH_MEDSA chr4 37145520 37149586 +
2 domain predictions
1 GO term
Lj4g3v2846380.1
n.a. PREDICTED: succinate-semialdehyde dehydrogenase (acetylating)-like [Cicer arietinum] gi|502139713|ref|XP_004503868.1| chr4 38159426 38164258 -
2 domain predictions
1 GO term
Lj5g3v0243290.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase 6-like [Cicer arietinum] gi|502126421|ref|XP_004499301.1| chr5 2026536 2029167 +
2 domain predictions
1 GO term
Lj5g3v0642800.1
n.a. PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cicer arietinum] gi|502173904|ref|XP_004515401.1| chr5 8897500 8904296 +
2 domain predictions
1 GO term
Lj6g3v0857970.1
n.a. PREDICTED: quinone oxidoreductase 1-like [Glycine max] gi|356544208|ref|XP_003540546.1| chr6 8603837 8607028 -
2 domain predictions
1 GO term
Lj6g3v2079240.1
n.a. PREDICTED: quinone oxidoreductase PIG3-like [Cicer arietinum] gi|502077683|ref|XP_004485715.1| chr6 24453796 24456717 +
2 domain predictions
1 GO term
Lj6g3v2192190.1
n.a. PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max] gi|356549501|ref|XP_003543132.1| chr6 25270461 25273645 +
2 domain predictions
1 GO term
LotjaGi1g1v0250300.1
n.a. NADP-dependent alkenal double bond reductase; TAIR: AT1G65560.1 Zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent); TrEMBL-Plants: tr|A0A0R4J5U6|A0A0R4J5U6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250300 LjG1.1_chr1 60127718 60134057 -
2 domain predictions
1 GO term
LotjaGi1g1v0250300.2
n.a. NADP-dependent alkenal double bond reductase; TAIR: AT1G65560.1 Zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent); TrEMBL-Plants: tr|A0A0R4J5U6|A0A0R4J5U6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250300 LjG1.1_chr1 60127718 60134057 -
2 domain predictions
1 GO term
LotjaGi1g1v0250700.1
n.a. NADP-dependent alkenal double bond reductase; TAIR: AT1G65560.1 Zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent); TrEMBL-Plants: tr|A0A0R4J5U6|A0A0R4J5U6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250700 LjG1.1_chr1 60183664 60197495 -
2 domain predictions
1 GO term
LotjaGi1g1v0303900.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT3G56460.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|A7RK30|QORL2_NEMVE Quinone oxidoreductase-like protein 2 homolog; TrEMBL-Plants: tr|I3T138|I3T138_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0303900 LjG1.1_chr1 74152558 74156836 +
2 domain predictions
1 GO term
LotjaGi1g1v0551600.4
n.a. NADP-dependent alkenal double bond reductase; TAIR: AT1G65560.1 Zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9SLN8|DBR_TOBAC 2-alkenal reductase (NADP(+)-dependent); TrEMBL-Plants: tr|A0A0R4J5U6|A0A0R4J5U6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0551600 LjG1.1_chr1 108297457 108300135 +
2 domain predictions
1 GO term
LotjaGi1g1v0607000.1
n.a. L-threonine 3-dehydrogenase; TAIR: AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q84V25|ENOXE_FRAAN 2-methylene-furan-3-one reductase; TrEMBL-Plants: tr|I3SDU3|I3SDU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0607000 LjG1.1_chr1 115179568 115181984 +
2 domain predictions
1 GO term
LotjaGi1g1v0607000.2
n.a. Quinone oxidoreductase; TAIR: AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q84V25|ENOXE_FRAAN 2-methylene-furan-3-one reductase; TrEMBL-Plants: tr|I3SDU3|I3SDU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0607000 LjG1.1_chr1 115184280 115189008 +
2 domain predictions
1 GO term
LotjaGi2g1v0151100.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G51970.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|Q9FJ95|DHSO_ARATH Sorbitol dehydrogenase; TrEMBL-Plants: tr|A0A151R8H8|A0A151R8H8_CAJCA L-idonate 5-dehydrogenase; Found in the gene: LotjaGi2g1v0151100 LjG1.1_chr2 54345790 54356270 -
2 domain predictions
1 GO term
LotjaGi2g1v0151100.2
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G51970.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|Q9FJ95|DHSO_ARATH Sorbitol dehydrogenase; TrEMBL-Plants: tr|A0A151R8H8|A0A151R8H8_CAJCA L-idonate 5-dehydrogenase; Found in the gene: LotjaGi2g1v0151100 LjG1.1_chr2 54346383 54356118 -
2 domain predictions
1 GO term
LotjaGi2g1v0246600.1
n.a. L-threonine 3-dehydrogenase; TAIR: AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q84V25|ENOXE_FRAAN 2-methylene-furan-3-one reductase; TrEMBL-Plants: tr|A0A1J7FNS5|A0A1J7FNS5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0246600 LjG1.1_chr2 71224236 71226327 +
2 domain predictions
1 GO term
LotjaGi2g1v0246800.1
n.a. L-threonine 3-dehydrogenase; TAIR: AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q84V25|ENOXE_FRAAN 2-methylene-furan-3-one reductase; TrEMBL-Plants: tr|A0A1J7FNS5|A0A1J7FNS5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0246800 LjG1.1_chr2 71238013 71242454 +
2 domain predictions
1 GO term
LotjaGi2g1v0268200.1
n.a. L-threonine 3-dehydrogenase; TAIR: AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic; TrEMBL-Plants: tr|I3S839|I3S839_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0268200 LjG1.1_chr2 73766046 73777942 -
2 domain predictions
1 GO term
LotjaGi2g1v0268200.2
n.a. L-threonine 3-dehydrogenase; TAIR: AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic; TrEMBL-Plants: tr|I3S839|I3S839_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0268200 LjG1.1_chr2 73766075 73777942 -
2 domain predictions
1 GO term
LotjaGi2g1v0329400.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT4G37990.1 cinnamyl alcohol dehydrogenase 8; Swiss-Prot: sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase; TrEMBL-Plants: tr|B7FIN8|B7FIN8_MEDTR Cinnamyl alcohol dehydrogenase-like protein; Found in the gene: LotjaGi2g1v0329400 LjG1.1_chr2 80494021 80496212 -
2 domain predictions
1 GO term
LotjaGi2g1v0329500.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT4G37980.1 cinnamyl alcohol dehydrogenase 7; Swiss-Prot: sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase; TrEMBL-Plants: tr|I3T3L8|I3T3L8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0329500 LjG1.1_chr2 80500025 80502835 +
2 domain predictions
1 GO term
LotjaGi3g1v0056100.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G61510.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|P28304|QOR1_ECOLI Quinone oxidoreductase 1; TrEMBL-Plants: tr|I3S389|I3S389_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0056100 LjG1.1_chr3 5886566 5889986 +
2 domain predictions
1 GO term
LotjaGi3g1v0056100.2
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G61510.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|P28304|QOR1_ECOLI Quinone oxidoreductase 1; TrEMBL-Plants: tr|I3S389|I3S389_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0056100 LjG1.1_chr3 5886581 5889989 +
2 domain predictions
1 GO term
LotjaGi3g1v0056300.1
n.a. Alcohol dehydrogenase, putative; TAIR: AT5G61510.1 GroES-like zinc-binding alcohol dehydrogenase family protein; Swiss-Prot: sp|Q59I44|CAA43_BURSP 2-haloacrylate reductase; TrEMBL-Plants: tr|I3SAA5|I3SAA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0056300 LjG1.1_chr3 5893995 5896206 +
2 domain predictions
1 GO term