Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0329500 |
| Transcript ID | LotjaGi2g1v0329500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alcohol dehydrogenase, putative; TAIR: AT4G37980.1 cinnamyl alcohol dehydrogenase 7; Swiss-Prot: sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase; TrEMBL-Plants: tr|I3T3L8|I3T3L8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0329500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80500025..80502835) extracted from Lotus japonicus Gifu genome v1.2.
GACAAAACTAATTCTCAGGAATCTCAGCCACTACAAATACCACATGATAAGAGGAGCATTGTCACATTCATTCTTACACA ACAACGCAACGCTCGCTTCTCTTCTTCTTCTTCTCTCTTTGCAATGGCGTCACAACCAGAGATGGAACACCCCAAGAAAG CTTTCGGCTGGGCAGCACGGGACTCATCTGGTGTTCTCTCCCCTTTCAAATTCTCCAGAAGGTTCTTCTTCTTCTTCACT ATTCATCTCTCCCCCTTATTCGAAATGTGATCGATGCATGTACTGGTTTTGCCCCCAAGATTCTTTGATCTTATTTTTTT TATGGTTTGATTGATCATGTGTTGATTTTGAAGATTCATGTTCTCTGTTGATGATGTGACATGTGATACCAAATTAATAT TTGATTTCTATTGTTTTTGCTATTTTCAGGGAAACAGGAGAGAAGGATGTGACATTCAAAGTGCTGTATTGTGGAATTTG TCACTCTGATCTTCACATGATCAAGAATGAGTGGGGATCTTCCGTCTACCCACTAGTACCTGGGTTAGTATGCTTTTTGA TGATGACTGCATGATAATTAAAAATTGGGTATGGGTCTAATTTGAAGTAGGTGACTGACTGGTGATGATATCATAGCTGA ATAAAGATAACCCAAAAAGAGGTGTAAAAAGTTTACTCGGGTTTCGTCTAATTGAAGCGTACTAGGTTTGTAAGGCTTGA GAGTGTCTGACTCGACTCGATTCTTTTCTTTCTGAGGTAATGAATAGTAGCGAGAAAAGTGAGAGATATGATAGGTGATA GGTCGATAAGGGATTGATAAGAAGAAAAAGTAGGTGAAAATTAGACGGACGAAAAAGTTGGATGAATTTATATAGAAAAA TTGGGATGGCACTTTTCATATCATGTCTCTGTGCTAAACAGGAATTGGACACATTCAGATTCCCTGAATTTACTTGAAAA AATAATATGCTTTTTGAGGTGCATGGAATTATTTTGAAGTCTGATTGCCCAAGTTGTTCACTCTCACAATTATAGTTATG CTTCTGATTTTCAATTAAAATTTTTGGAAGTGATTTGTATGAGTAATTCATTTCATTTTAATTTATGTTATGTACAGGCA TGAGATTGCTGGTGTGGTGACAGAGGTGGGTAGCAAGGTGCAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTGGGATGCA TGGTTAACTCCTGCCGCTCATGCCAAAGCTGTGCTGATAATCTTGAGAATTACTGCCCCAAAATGATTCTGACATATGCT GCCAAGAATGTTGATGGCACCATCACATATGGAGGCTATTCTGACTTGATGGTTTCGGATGAAGACTTTGTGATCCGCAT TCCGGATAACCTACCACTTGAAGCTGCTGCACCTCTCCTATGTGCTGGGATCACAGTGTATAGCCCTTTGAAATATTATG GACTTGACAAGCCTGGTCTTCATGTGGGTGTGGTTGGTCTTGGTGGGCTAGGCCACATGGCTGTGAAGTTTGCCAAAGCC CTTGGAGCTAAGGTCACTGTGATTAGTACATCTCCTAACAAGAAGACTGAGGCAATTGAAAAGTTAGGAGCTGACTCATT TGTGGTTAGCCGTGAACAAGATCAGATGAAGGTGCGTTTATAATTTTGATTCTTTGCTGTAAATAGTAACTCCCTCATAA TTTGGTTTTTGATTGAGTAGTGTAATCCTCTGGCCTACCGCATTTAGTTGGATAAGGCTTTTATTGTTGTTGTTGTTGTT TGCTGTGAATAGTAGCATTTGTGAGAAATAGATAAATCAATTATCAAATTCTAATGATCTTTCACTATGCAGGCTGTAAT GGGAACCTTTGATGGTATCATTGACACTGTTTCAGCTGTCCATCCTCTCTTGCCTCTGATTAGTCTGTTGAAGCCTCATG GCAAACTTGTCATGGTTGGTGCACCAGAGAAGCCTCTGGAGGTGCCAGTGTTCTCTTTACTTGGAGGTAAGCATATAGCA AATAATGTCATCGTTGCATCTTTTTAGCAAAGAGCCCTATCAGACTCGCCATATGTGGAGAGTTCTCCATTCTATTTTTA TTTGCTGCAGAATATTAAGTTTTGGAGCTTACTAATGATCCACAATTTTTCAGGGAGAAAGACAATTGCTGGCAGTATGA TTGGAGGGATTAAGGAGACACAAGAAATGATTGATTTTGCTGCCAAACATGATGTGAAACCTGAGATTGAGGTGATTCCA ATGGATTATGTGAACACTGCAATGGAGCGCCTTCTCAAAGCAGATGTGAAATATCGGTTTGTTATTGACATTGGAAACAC TCTGAAGGCAAGCTCATCAATATAAAATATGATGATTCAGATTTCAGATACTGAAAGTAGGACATGTGGAAAGGGCTGAG GCCTGAGATGATCTGTTTCATTCTTAGCAGAACTTTTGTCTTGTTTAGTGAGATTTTGCTTTGAGCATTTAGGCTCTTCC TTGATAAATAAATTGTGGTGCATTTAAGCTCGGTTGTACTATAATCCCATTGTTTGGGAACAAAATTGTTCTGTACTACA TTTTTAAGATAAGAAATTATATGTGAATTTGGAGACTTGGAACATCAAACTGTTCGTTTTTTTTTTTCACTGGTGAGGAA ACTGTTAGGTTGAAGATTTTATTTATTAAGCGTGTCCTGAATTAACTAAAAACGAATGTTTCTTTTTTCTTGTTAGAACT TAGAAGGGAGAACATAGAAGAATATATGACACCAATAGAATTATTTGAAAGGATTGCTATATAAGGTTAGTAAGTGTAAT TTCTTTTAATT
CDS sequence (LotjaGi2g1v0329500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCACAACCAGAGATGGAACACCCCAAGAAAGCTTTCGGCTGGGCAGCACGGGACTCATCTGGTGTTCTCTCCCC TTTCAAATTCTCCAGAAGGGAAACAGGAGAGAAGGATGTGACATTCAAAGTGCTGTATTGTGGAATTTGTCACTCTGATC TTCACATGATCAAGAATGAGTGGGGATCTTCCGTCTACCCACTAGTACCTGGGCATGAGATTGCTGGTGTGGTGACAGAG GTGGGTAGCAAGGTGCAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTGGGATGCATGGTTAACTCCTGCCGCTCATGCCA AAGCTGTGCTGATAATCTTGAGAATTACTGCCCCAAAATGATTCTGACATATGCTGCCAAGAATGTTGATGGCACCATCA CATATGGAGGCTATTCTGACTTGATGGTTTCGGATGAAGACTTTGTGATCCGCATTCCGGATAACCTACCACTTGAAGCT GCTGCACCTCTCCTATGTGCTGGGATCACAGTGTATAGCCCTTTGAAATATTATGGACTTGACAAGCCTGGTCTTCATGT GGGTGTGGTTGGTCTTGGTGGGCTAGGCCACATGGCTGTGAAGTTTGCCAAAGCCCTTGGAGCTAAGGTCACTGTGATTA GTACATCTCCTAACAAGAAGACTGAGGCAATTGAAAAGTTAGGAGCTGACTCATTTGTGGTTAGCCGTGAACAAGATCAG ATGAAGGCTGTAATGGGAACCTTTGATGGTATCATTGACACTGTTTCAGCTGTCCATCCTCTCTTGCCTCTGATTAGTCT GTTGAAGCCTCATGGCAAACTTGTCATGGTTGGTGCACCAGAGAAGCCTCTGGAGGTGCCAGTGTTCTCTTTACTTGGAG GGAGAAAGACAATTGCTGGCAGTATGATTGGAGGGATTAAGGAGACACAAGAAATGATTGATTTTGCTGCCAAACATGAT GTGAAACCTGAGATTGAGGTGATTCCAATGGATTATGTGAACACTGCAATGGAGCGCCTTCTCAAAGCAGATGTGAAATA TCGGTTTGTTATTGACATTGGAAACACTCTGAAGGCAAGCTCATCAATATAA
Protein sequence (LotjaGi2g1v0329500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASQPEMEHPKKAFGWAARDSSGVLSPFKFSRRETGEKDVTFKVLYCGICHSDLHMIKNEWGSSVYPLVPGHEIAGVVTE VGSKVQKFKVGDRVGVGCMVNSCRSCQSCADNLENYCPKMILTYAAKNVDGTITYGGYSDLMVSDEDFVIRIPDNLPLEA AAPLLCAGITVYSPLKYYGLDKPGLHVGVVGLGGLGHMAVKFAKALGAKVTVISTSPNKKTEAIEKLGADSFVVSREQDQ MKAVMGTFDGIIDTVSAVHPLLPLISLLKPHGKLVMVGAPEKPLEVPVFSLLGGRKTIAGSMIGGIKETQEMIDFAAKHD VKPEIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKASSSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 358 | 358 | 2.6E-218 | – | |
| PANTHER | 1 | 358 | 358 | 2.6E-218 | – | |
| CDD | 14 | 352 | 339 | 0.0 | – | |
| SUPERFAMILY | 20 | 184 | 165 | 6.7E-54 | ||
| Gene3D | 21 | 351 | 331 | 6.1E-152 | – | |
| SMART | 23 | 351 | 329 | 7.7E-7 | ||
| Pfam | 38 | 151 | 114 | 9.2E-28 | ||
| ProSitePatterns | 71 | 85 | 15 | - | ||
| SUPERFAMILY | 156 | 322 | 167 | 1.73E-42 | ||
| Gene3D | 167 | 323 | 157 | 6.1E-152 | – | |
| Pfam | 194 | 317 | 124 | 5.9E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0329500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…