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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR021863
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.167s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0123589.1
n.a. PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum-like [Cicer arietinum] gi|502129346|ref|XP_004500272.1| chr0 55439744 55441358 -
2 domain predictions
2 GO terms
Lj1g3v2337910.1
n.a. chloroplast omega-3 fatty acid desaturase [Vigna unguiculata] gi|164521896|gb|ABY60737.1| chr1 27639045 27642865 -
2 domain predictions
2 GO terms
Lj1g3v4317650.1
n.a. oleate desaturase [Caragana korshinskii] gi|145280641|gb|ABP49577.1| chr1 50825225 50830211 +
2 domain predictions
2 GO terms
Lj2g3v2277520.1
n.a. microsomal omega-3 fatty acid desaturase [Glycine max] gi|34787276|dbj|BAC87757.1| chr2 33277483 33282202 -
2 domain predictions
2 GO terms
LotjaGi1g1v0119600.1
n.a. Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp|P48625|FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum; TrEMBL-Plants: tr|A0A151RE40|A0A151RE40_CAJCA Omega-3 fatty acid desaturase, endoplasmic reticulum; Found in the gene: LotjaGi1g1v0119600 LjG1.1_chr1 18862026 18867276 +
2 domain predictions
2 GO terms
LotjaGi1g1v0726200.1
n.a. Fatty acid desaturase; TAIR: AT3G12120.1 fatty acid desaturase 2; Swiss-Prot: sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2; TrEMBL-Plants: tr|I3S3W4|I3S3W4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726200 LjG1.1_chr1 129723834 129729459 +
2 domain predictions
2 GO terms
LotjaGi3g1v0193900.1
n.a. Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp|P48620|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|B6CI32|B6CI32_VIGUN Chloroplast omega-3 fatty acid desaturase; Found in the gene: LotjaGi3g1v0193900 LjG1.1_chr3 28081223 28085392 -
2 domain predictions
2 GO terms
LotjaGi6g1v0123500.1
n.a. Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp|P32291|FAD3E_VIGRR Omega-3 fatty acid desaturase, endoplasmic reticulum; TrEMBL-Plants: tr|I3TAN8|I3TAN8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0123500 LjG1.1_chr6 31539874 31545069 +
2 domain predictions
2 GO terms