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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR021950
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.270s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2576290.1
n.a. Protein FAM48A, partial [Caragana korshinskii] gi|480328083|gb|AGJ83743.1| chr3 31648172 31654163 -
2 domain predictions
2 GO terms
Lj3g3v2576290.2
n.a. Protein FAM48A, partial [Caragana korshinskii] gi|480328083|gb|AGJ83743.1| chr3 31648172 31655392 -
2 domain predictions
2 GO terms
LotjaGi3g1v0411400.1
n.a. Transcription factor Spt20; TAIR: AT1G72390.1 nuclear receptor coactivator; Swiss-Prot: sp|Q8NEM7|SP20H_HUMAN Transcription factor SPT20 homolog; TrEMBL-Plants: tr|K7MEJ0|K7MEJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0411400 LjG1.1_chr3 81521689 81530881 -
2 domain predictions
2 GO terms