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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0411400 |
| Transcript ID | LotjaGi3g1v0411400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor Spt20; TAIR: AT1G72390.1 nuclear receptor coactivator; Swiss-Prot: sp|Q8NEM7|SP20H_HUMAN Transcription factor SPT20 homolog; TrEMBL-Plants: tr|K7MEJ0|K7MEJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0411400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81521689..81530881) extracted from Lotus japonicus Gifu genome v1.2.
ACATGTTATCACACTATTCAAATTTAGTTTTAATTATAAACTCTATCACGTGCCTTCTCTCACACTCCTAATTCTTCCCG TTCTTTCTTCTCGTTGTGCCCATTGAAATCTTCTAGTTCTTTGTGCAGTGCCTTGTTCACTCCATCATCTCTTACTCATC TACTCTGGGTGTTGTTCCTATTATGCCAACCCTCTCGCGCGCATGACCAACGACGCCACCTCATTCTTTCAGCTTCAAGT GCCTGTTCATTTTCTAGCAACCCTCTCACATGCACACATCAAGAGGCATCTTACACACACATGACGATTTCTAACAACTC CATCCGCATGTCATTTAAACAAGTTTCGTCTTCTTTATTTTCCTTTAGGTTCTGGATTTTTACCCTTCATTTCTAAGTAT TTCCTTCCACTTTCATTCTTCTCACTTTTCTTTCTCATCCAAACACACCTAAAATTAAAATTGACTATATTTTCTCAGGC TTTTTCAACACTTACCAAATCTGATAAAAGCAAAAAAAAAAAAAAAAAAAGAGTAAAATAAATTTTCATTCTTTTTTACA AGAACACAAAGAAAAAGAAGTCTTTCCCCAGAAGAAAACTGAAGCCAAACGAAGCGTAAATCCGAAACCTTGAATGAACT TGTCTTCAGCACTCGCAGCATTTAAACAAATAAACACAAACACTCTCTCTTCCTTCTTTGTTCTTTTCTGATGAATTTCT AGGGTTTTGATTTCCCCAATCTTCACAAAATTCAGAGTCCCCCCATGGGGCTCTCCTTCAAGCTCTCGAAGTCTGGCACT AGGTATCGCCCCAAACCCCTTCCCATTCCACCCGAAGCTTCCCACGATGGTGTATCCGAGAATTCCAAGTCTCAGGTAGT TAATCTGACCAATGTGCAAGCAATTCAATTAGCTAATTCTACTGGAATTCACGAATTGAATTCTGGGTCTTGCTCTTTGA TTTCTAAAGTTTGTTTTTTCACTGTTATTATGTGCTTGATGACGTTTTCGGTTGAAATTCGACACTAAACCACAAATCTA AATCTTTGTCTTCCTCTTTGATGTCAAATGTTTTGTGCTTTTGCTTTTATGTGCCTGATGATGTTTCTGTTTGAGATTTC GAATAAGGAGTTGAGGCTAACAACATGTAAGAATTGAAGGGCTTGGTAGCTTGTTATTTTCTTTTACGAAAGGGTTGAGT CTTCCATGAGCTGTGTCTTATTGTTCAATCGGCTAGTATATTCATCTATGATTTGACTACATTCAATTGAAGTGTCAATG CAAACAGTGGGAACGGTTCAATATTTCGGTAGTTTAGTTACTTTGTATTTTTTTTAATGCAGAGTCATCTTGTTGAAGCT GGTGAAAATACTGCTCGGATGCTCAATTCATCTGTTTCATCTGAAACTCGTCCGTTAGCAGGTCAGTCATCAAGTTATTT TGATACTTAACTTGTGCATAAATCCTGAGTGTTGTGGTTCTTGTTTTGACAGAGATGGAAGCTTCTTTTACACTGAACCT GTTCCCAGATGGTTATTCTATCGGAAAGCCCTTTGAGGTTTGTTTGAGATACCAGTTAATATTTTGCAAATGCTGAAGGA ATTATCTAAATGAGAAAGAACTTCTAGTTCGACCTTTTATGTTTCTAAGTTATATCATTTATGGATTTTTAGAATGATAC GGCGAGTCATTCGAGATATCAAGATTTGCCAAAGTTGTTACATCCATATGATAGGTCATCTGAAAGCCTTTTCTTGGTAA TTCTCTTGAAATTCTATATTTTTCTTGTTCTTTTAGTTCTAGCTTCTATGTTCTGAAGTATTGCAATTATGATAGTAAAA AATTGTTAGTATAATCACTTAATTGTAGGATTTTGCAATTAGGAACCGCTTGGGCGATTAAAATCACTTCCGTAATCATT TGCTCCCTTAACCTTACCTTAATCGCACCATTATTGCGGTTATAGGCGAGTATGCAATTAAGAGAAAGCCAACTTCAGTG CCATAAAAGCAGTTTGGACCACCGAAAGTTGTCATCGTATGATGACCTCAGTTTTTGTGCAGCACTGCAAGAGGAATAAA AAGAAGGATGAGGAGGGTAGAGAGCCCGATCTAGTGACGGTAGAAGAAGTGGACTAGATGAGAAAGAAATAATGACAAGG GAAGAAGAAGGAAGAGCTCGTTTAAACTAACAGTAGTGTAGGTAACAAAATGGAGTAATGACTTAGGGTTTTGGAAGTTA ATGGGTTTAAGCCCAGTCAGTGTTTTAAAAATAAAATAAGAAAGCTCATCACATGCCTGGTTTGGAGCAGCAGAGATCAA TTTTAACTCAATTTATAACATATAATAAATATTATGGGAGTATATAATGTATATATATATATATTATAAATATAATAATT AGCATATATTTATAAAATATTGTAATAAATCAGCATAATATTTTTTAAAATATAATCTGTATAGTGTATAGTAATTTTGC TAAATCTTACCATTATTCTTACGATTGTGCGTAGATTAACTCACCCCTTCCCGATTAAGTTCATAATCCTGACTTTGACT ACTATGATTGCAATCAATGATTGGGACATTCAATGATTTCTACTTGTATAATAAACGCTGCTATGGATGTGAAAAGTCTC ACGCACTAATCTTTCAACACTGTTGACTTGATTCAATTGATTCTTAAAATCTGGCATAATTGAGCTTTATAGTTTGAGTT GAGTGCTGCTGGATTTGAGCTACTTGTTTCCACCTTCTTGACATTGTCTAACTGTAACTTGGAAATGGAAATAACCCCAG AAGCTATGCTTTTCTCTGGGTCTTTTCCTTTGGTAGCTTCAAATTCCTTGTCTTACTCAACATCATGCTTTTTCTTAATT TTTTTTATCATTTTCTATTTGTCTACTTATGTAATCCCTTTCATGTACTTACCTCCCTATTTTTTGTAATGATGTTTTTG GAGGCCATTGAGTCGGGTCATTTGCCTGGGGATATTCTGGATGATATACCTGCCAAGTATGTTGATGGAGCACTTATATG TGAGGTGAGCCTTATTTATTTTTGGTATGCTTTAGTTTTAAAGGTGACGAATAAATTTCCATTCATTATTTTATGAAAAA TTATTTAAGGGTGCACAAATGTTCTTCCAGGTTTTAGTTTAGTTTGCTGTGTTTATTGTGTATAAAGGAGTAGCAGTTAT TTGATACTCTTTTTGCTACGGGATCTCTTTCTCATTGGCATCTGTTTTGGTTTTGTCTCTTTTCATTGTGGAGAGCTTCT TGATTGCCATTTTGCGAGCATTGTTTCTTCTTACTATTTGCCAAATCTTATCACCATTTCATATATACTTTTAATGACGC ATGCTGTTTACAAGATTGGGCTTTGTACAATATTTTACCTCAGGTGCGTGATTATCGAAAGTGCTCTTTTGAAAAGGGGG CCGGCATAGTGTCTCCGGAAAGTTCTCCTCTTGTTAATAAAGTATGCCTCAAGATGTCATTGGAAAATATTGTGAAGGAC ATCCCATCGATTACTGATAAGTCTTGGACATATGGTGATCTAATGGTGAGTATGATCTACCATCTCATGAATGACCAACT CCTATAATTTTATCATTTCTTGGGTGTTGATCTCACTTAACTATGTTCATATTGATAATAGGAAGTTGAATCGAAGATAC TGAAAGCATTAAAACCAGACCTTCATCTAGATCCTGCTCCAAAGTTAGAACGGCTCTGTGAAAGTTCACTTCCACCAAAG GTATAAACAAGCTAGATCCTCCCATGATGAACTTATTTTATGGCTGTTTTCATATTACTGATGTTGAACTTGATATTGCA GCTCGATTTACGGAGAAAGAGATTAAGAGATATGCCAGAGTTCGCTGTTACTTCTAGTAATAGAATTTATGGGAAGAAAG TTTGCATAGATAGAGTGCAGGAAAACTCAAATAACAGATTAGTTGATTCAGGAATAACTGCATCTAATGCTATTGTGCAA CAGAGTCTTGAAAATCCAGCAATGCAAAATCATAGTCCAAACATTGCCATGGCCTTGAGATCTAAGAATCTTATGCCAGA TTCTTCTATCCCGGGCTTTTCTATGCCTCCCCAGCAATCAAGATATGCAATGGCAGTTGGAAATCCAAGAAGCTTGCAGG AGCATGGATCAGTTTCTGCTATTAATTCATCAGGGGCTTCTCCTGCTGCACAAGATGTCATGATTTCATATACTGATGAT GCAAATCCAAGTGCCTCTCTTCATTCAAAAAGGGAGAATCAAGATGGACAAGCTTCACCTTTATCCAATGTTGCAAAAAG AATGAGGCCTGCTTCCACTGGTGTTGATGCAATGCAGCAGCAGCAAATTGGCTCGCATGTTGAAGGTCTTCAAGGATCAG AAATAAATTGGCAAAATACACTACTACAACAACAAGCGATGGCCAGAGGTATTCAATATGCAAGTGGTGGCATTCAGAAG TTTCCCCAGCAGGTTTTTGAAGGGGGGTTGAATCAGGAGACAGGAGCTATTCAATTTGCTTCTAGTCAGCAGGGCATGAG GTTAGTTGCCAAGGAAGAACAGTTTGAAATGGAAAAATTAGATGGCGCAGAGATAAACCGCAATAAAAGTGAGATGGGAA TAGATACCGTCAATTTAGACCCACAACAATTACGGCCTCAGCAAAGATTGCAACCGAATGCATTCATGAAACCTAATTTC TCTCAGACAACCTGGAATAATCTGGCTCAGCAGCATATGGAGAAAGAAGCAAAAAAAGAGGACCAGTTCCAGAAGAGGAA ATCAGTCCAGAGTCCTCGCTTATCTACTGGAGCATTACCTCACTCTCCATTATCTTCAAAATCAGGTGAATTTTCCAATG GTTCAGTTGGACCAAGTTTTGGTGGTCCATCACAACTGGCTTCAGTTCCTGCTGTTGGAACTCCTTCTATTTCTAATGAT TCTACACAAAGGCAACAACAAGCACAACTAGCTGCCAAGCGGAGATCTAATTCCCTTCCCAAGACCCCAGCAATGAATGG AGTTGGTTCTCCAGCTAGTGTTACTACTGGTGTCCCAATGAATGTAAATAGTCCTTCACTTGGGACCTCGTCTTTGGTTG ATCAAGGTGTTCAAATTCAAAATATGGTTGAGAGGTTCTCAAAAATTGAAATGGTGACAATGAGGTATGCTATTTTAATT TAGAACTGCATCTCAAGATTATTTTAATAATCCTATATCATCCACAAACTTTTAAATTTTTCAAAAAATTATAGTGCAAG TATTCTGTAGTGGTGATGGGAGGTTTTGATCGGATTTTTAATCACACATATTCTCCGCACCCTTGGAGATCTGAAGAGAT TTAGGGCCTGTTTGGTTTAAGAAAGTGTTTTTTTTTCATGATTAATTACATAAATGTCATTTTGTTGTCACTTTGTTTCT TATTTTAATGTTATGTATAGAAAACAAGAAAAACAAGAAAAAGTCTAGTGTCTGAAAGTTATCGGCTTATTTTTTTCTCA TTTTATATATATATATATATATATACCTACTAGCCTTTTCTCCTGATTTATGTTTTCAAATTTTGTGATGTTCATCTTCC TGTTCTTACATATAACTATGGACTTCTATCAGGCATCAACTTAACTTTAAGAAGAAGGTTGATGATTATCCCATCCAAAA GCAGAATACATATTCAACACAGCCATTAGCTTCGCATCTTGGTAATGCGATTAATAATGAGGGATTGACAGATGAACCAA GTTCTTTATCAAAGTCACTTATTGGTGGGAGTATGAACGTATGCAAAATGAGAGTCTTAAATTTCTGTTTGCCAGAGCGT GTACTTCAAGGTTTGTTGCCTTTTTTGCTAATTCTGTTGTTCTTGACAACATATATTTTCTTCGTTGTCTGACATTCCAT TTTCTTCTACAGGAAATGTTTATTCTCTAGTTCCGAAGTTGCGTACTAAGATGATAATGTCTGAGAAGCCATCCGATGGT ACTGTGTCTATGCATTATGGGGACATTGATGAAGGTGATTTTGTAGCTGCAGAGGATCATCTCCCCACATTACCCAATAC TGTAAGTTTACTGAGAGTCAATTTTTTTTGGGTTATATATAAGGATTTACATATGAAGTTAGTTGAATGCATTCTGCTTC AATTATTTGAGGTATTATTCACCTTTTTTCTTATATCCTTTGTCAATCCATTCAAAACATTTATTTCCTATCTATATTAA AAGTACCTTAAGTCTTTCTCATCACCCTTTCAAACCTTGTAGCTTTGATACCCTTTTGGGGGGAATCCTTTGTTATTTTA CCCTAGTACCACCATTCCTTTCATTTTCTTTCCATGTAAAATTTGGACAAAATGTTACTGTCCTGTATTAACTTTGACTT TCACTTCCCGAGGACACTTGTTTATCTTCTGCAGCCTCCATTTCGTCCCAAGGCACAGCTGTATTTTCCATTGTTATTTT GGAAAGATAATTTTTGTACTTCATTTATTTAGTTGGAATTAACATGATGGTGTATTGGTATTTGGTCATTGTTGATCTTG AAATCACTGTAAAAAAGATAACTAGCTATCAAAGTTCTAGTAGCACATTTAAATTTCCTGCCATTCATTTTTCTGCAACT TTGGCGCTGATTTATGTTACCAATTTGTGAATCAGCATTTTGCAGATTTGCTCGCAGAACAGTTCTGTTCTCAGGTATGT TTCTCGTTCGGAGTTGGAATCATATTGAAGACAAATCTAGGTCAATTTGTTTTTTAATAGCTTAATCTGCCATCTATGTA GATGGCACGTGAAGGATATGTGAGGGAAGATGACAGAGTCCAAGTCAAACCGAACCGGGTCAACTTTCCATTGGGAAGTC AATCTAGTGTACCTCCTAATAGCTCTGTAGGTGACATGCAGCAATACGGAGAACAAATGCCGGGTCAGTCACCCAATGAA GGTCCAAAGCCAGCTGGTGGCAGTAACGCATCATTCAACTTACCTCAGAATCTTGTAGTAAACTCAAGGATGTTGCCACC TGGAAACACTCAGGCGTTACAGATGTCTCAAGGACTTCTCTCTGGTGTTTCGGTGGCTCCAAGACCACAACAACTGGACC CGCAACAAGCAGTACAGCAACAGCAGCAGCAGCAGCACCACCAGCAACAGCAGCTGCAACCAAATCAACACTCTCTCATT CAACAGCAGAATCCCCAGTTCCAGAGATCTATGATGCTTGGGACAAATCAGCTGTCACACTTAAATGCACTTGGACAGAA CTCCAACATGCCATTGGGTAATCACATGCTCAACGCTAAGCCTTCACCTATGCAGATGCAGCAGATGTTACAGCACCAGC AACAACAGCCGCAAATGCAAAGGAAAATGATGATGGGGCTTGGAACAGCTATGGGAATGGGTAACTTGAGAAATAGCATA GTTGGACTTGCACCCCTGGGCAATACTATGGGAATGGGATCTGCAAGGGGAATAGGAGGAACTGGAATCTCAGCACCAAT GACATCTATTGCCGGCATGGGAAATATGGGTCAGAACCCAATGAATCTTGGCCAGGCTTCAAATATTACTAATTCTATAA GCCATCAATTCAGGCCTGGAACAATGACTTCACAATCGGCTGAACTTATATCTAAGCTTAGACTGGCACATAGTCGGGGA AGCATGTTAGGGTCGCCTCAGTCTAGCATAGCTGGTATCTCTGGGGCCAGACAAATGCACCCTGGCCAGGCTGGTCTTTC ATCAGTGTTGGGTCAGACTCTAAATAGGGCTAATATGAATACACTGCAGCGAGCGCTCGGACCTATGGGTCCACCAAAGC TGATGGCAGGGATGAATATTTATATGAATCAGCAGCAGCAGCAACATCAACCATCTCAGCAGCAGCAACAGCAACAGCAA CAGCAGATGCAATTACAACATCAGTTGCAGCAGCAATTACAGCAACAGCAGCAGCAACAGCAGCAAGAAATAAGTTCGCA ATTGCAGGCAGTTGTTTCACCCCCCCAGGTGGGATCACCGTCTACCATGGGAGTTCCACCATTGAACCAGCAAACAGCGC AGCAAGCAAGCCCTCAGCAAATGAGTCAACGAACTCCGATGAGCCCACAACAGATGAGCTCAGGGGCAATTCATGCCATG AGTACTGGTAATCCTGAAGCTTGTCCAGCGAGTCCGCAGTTGAGCTCTCAGACCCTAGGGTCTGTTAGTAGTATGGCGAA CTCCCCTATGGACATGCAAGGTGTTAATAAGAGTAATAATGCTCAATAAAGAAAAGTAGCCTAAATTGTCCAAATCAATG CCCTTTGGAAATTTCAGCACCAAAATCAGCTATCAAATGATTTTATCTTGAATTTATGAGCTGAGCTAATTTTTTACATA TAAATAAACATAAAGCCAGTTGTTGATACCTTTGGGGAACTAATGTGCTGCTCTGGATCTCTAGAAGGAATAGATTATGC TGTGTCAATTTGTATATACTATATAGTTTCTTGTTTTCTTTCGCACTCTTTGAACTTACAGGTAGTTTTTTTTGGATATT TAGGCCAAGATTTGTTGTAGCTACTTTGTGTATTGCTGGAATTGGTACTGTTTTTATTATATTTTGTGGGTTAAGAAAAT CATCGCCTCAGCTGCCATCAGATTTCAAATCAATTAGGGTCGTAGAACCGCCATTTCTGGCAGAACAATTTGTCACAATG GACATATACTGTAGATAGAAAGCGTTTTATCTTAAATACATGTTAACATTCATTTGCGCGGGTGCTAACAGATATTACTC GTGGTGGGGGTTGCTGGGATAGTGAAAAGAAGGAAAAACTATGGGGTTTCTGAGATAGTGAAACGAAAGGAAAAACTAAA AAGTAAAAGAAAAATATTACAATAGGAATGTAAAACGTCTACATTAGGGAAAGGGAAACCACCACTAGAAGGTCTCCGAA TATTGTTTTTTTCACACCTATTATTGACGTGAAAAGAGGTGGATGGAGGAGAGAGATAGAAAAAAAAAGCGATAAAATAA AGATGTGATAAATGATTTAATTAAAAAAGAAGAAATATATTGAAAATGAAGGTGTAAAAAGAGTGAAAATGAATCATAAC TCAAAGAACTCCCTATCGAAAGAGGAGTGACTAACTGCAACATTAAAAGCTAGGACTCGAAGTTGAAGCTCAG
CDS sequence (LotjaGi3g1v0411400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCTCTCCTTCAAGCTCTCGAAGTCTGGCACTAGGTATCGCCCCAAACCCCTTCCCATTCCACCCGAAGCTTCCCA CGATGGTGTATCCGAGAATTCCAAGTCTCAGAGTCATCTTGTTGAAGCTGGTGAAAATACTGCTCGGATGCTCAATTCAT CTGTTTCATCTGAAACTCGTCCGTTAGCAGAGATGGAAGCTTCTTTTACACTGAACCTGTTCCCAGATGGTTATTCTATC GGAAAGCCCTTTGAGAATGATACGGCGAGTCATTCGAGATATCAAGATTTGCCAAAGTTGTTACATCCATATGATAGGTC ATCTGAAAGCCTTTTCTTGGCCATTGAGTCGGGTCATTTGCCTGGGGATATTCTGGATGATATACCTGCCAAGTATGTTG ATGGAGCACTTATATGTGAGGTGCGTGATTATCGAAAGTGCTCTTTTGAAAAGGGGGCCGGCATAGTGTCTCCGGAAAGT TCTCCTCTTGTTAATAAAGTATGCCTCAAGATGTCATTGGAAAATATTGTGAAGGACATCCCATCGATTACTGATAAGTC TTGGACATATGGTGATCTAATGGAAGTTGAATCGAAGATACTGAAAGCATTAAAACCAGACCTTCATCTAGATCCTGCTC CAAAGTTAGAACGGCTCTGTGAAAGTTCACTTCCACCAAAGCTCGATTTACGGAGAAAGAGATTAAGAGATATGCCAGAG TTCGCTGTTACTTCTAGTAATAGAATTTATGGGAAGAAAGTTTGCATAGATAGAGTGCAGGAAAACTCAAATAACAGATT AGTTGATTCAGGAATAACTGCATCTAATGCTATTGTGCAACAGAGTCTTGAAAATCCAGCAATGCAAAATCATAGTCCAA ACATTGCCATGGCCTTGAGATCTAAGAATCTTATGCCAGATTCTTCTATCCCGGGCTTTTCTATGCCTCCCCAGCAATCA AGATATGCAATGGCAGTTGGAAATCCAAGAAGCTTGCAGGAGCATGGATCAGTTTCTGCTATTAATTCATCAGGGGCTTC TCCTGCTGCACAAGATGTCATGATTTCATATACTGATGATGCAAATCCAAGTGCCTCTCTTCATTCAAAAAGGGAGAATC AAGATGGACAAGCTTCACCTTTATCCAATGTTGCAAAAAGAATGAGGCCTGCTTCCACTGGTGTTGATGCAATGCAGCAG CAGCAAATTGGCTCGCATGTTGAAGGTCTTCAAGGATCAGAAATAAATTGGCAAAATACACTACTACAACAACAAGCGAT GGCCAGAGGTATTCAATATGCAAGTGGTGGCATTCAGAAGTTTCCCCAGCAGGTTTTTGAAGGGGGGTTGAATCAGGAGA CAGGAGCTATTCAATTTGCTTCTAGTCAGCAGGGCATGAGGTTAGTTGCCAAGGAAGAACAGTTTGAAATGGAAAAATTA GATGGCGCAGAGATAAACCGCAATAAAAGTGAGATGGGAATAGATACCGTCAATTTAGACCCACAACAATTACGGCCTCA GCAAAGATTGCAACCGAATGCATTCATGAAACCTAATTTCTCTCAGACAACCTGGAATAATCTGGCTCAGCAGCATATGG AGAAAGAAGCAAAAAAAGAGGACCAGTTCCAGAAGAGGAAATCAGTCCAGAGTCCTCGCTTATCTACTGGAGCATTACCT CACTCTCCATTATCTTCAAAATCAGGTGAATTTTCCAATGGTTCAGTTGGACCAAGTTTTGGTGGTCCATCACAACTGGC TTCAGTTCCTGCTGTTGGAACTCCTTCTATTTCTAATGATTCTACACAAAGGCAACAACAAGCACAACTAGCTGCCAAGC GGAGATCTAATTCCCTTCCCAAGACCCCAGCAATGAATGGAGTTGGTTCTCCAGCTAGTGTTACTACTGGTGTCCCAATG AATGTAAATAGTCCTTCACTTGGGACCTCGTCTTTGGTTGATCAAGGTGTTCAAATTCAAAATATGGTTGAGAGGTTCTC AAAAATTGAAATGGTGACAATGAGGCATCAACTTAACTTTAAGAAGAAGGTTGATGATTATCCCATCCAAAAGCAGAATA CATATTCAACACAGCCATTAGCTTCGCATCTTGGTAATGCGATTAATAATGAGGGATTGACAGATGAACCAAGTTCTTTA TCAAAGTCACTTATTGGTGGGAGTATGAACGTATGCAAAATGAGAGTCTTAAATTTCTGTTTGCCAGAGCGTGTACTTCA AGGAAATGTTTATTCTCTAGTTCCGAAGTTGCGTACTAAGATGATAATGTCTGAGAAGCCATCCGATGGTACTGTGTCTA TGCATTATGGGGACATTGATGAAGGTGATTTTGTAGCTGCAGAGGATCATCTCCCCACATTACCCAATACTCATTTTGCA GATTTGCTCGCAGAACAGTTCTGTTCTCAGATGGCACGTGAAGGATATGTGAGGGAAGATGACAGAGTCCAAGTCAAACC GAACCGGGTCAACTTTCCATTGGGAAGTCAATCTAGTGTACCTCCTAATAGCTCTGTAGGTGACATGCAGCAATACGGAG AACAAATGCCGGGTCAGTCACCCAATGAAGGTCCAAAGCCAGCTGGTGGCAGTAACGCATCATTCAACTTACCTCAGAAT CTTGTAGTAAACTCAAGGATGTTGCCACCTGGAAACACTCAGGCGTTACAGATGTCTCAAGGACTTCTCTCTGGTGTTTC GGTGGCTCCAAGACCACAACAACTGGACCCGCAACAAGCAGTACAGCAACAGCAGCAGCAGCAGCACCACCAGCAACAGC AGCTGCAACCAAATCAACACTCTCTCATTCAACAGCAGAATCCCCAGTTCCAGAGATCTATGATGCTTGGGACAAATCAG CTGTCACACTTAAATGCACTTGGACAGAACTCCAACATGCCATTGGGTAATCACATGCTCAACGCTAAGCCTTCACCTAT GCAGATGCAGCAGATGTTACAGCACCAGCAACAACAGCCGCAAATGCAAAGGAAAATGATGATGGGGCTTGGAACAGCTA TGGGAATGGGTAACTTGAGAAATAGCATAGTTGGACTTGCACCCCTGGGCAATACTATGGGAATGGGATCTGCAAGGGGA ATAGGAGGAACTGGAATCTCAGCACCAATGACATCTATTGCCGGCATGGGAAATATGGGTCAGAACCCAATGAATCTTGG CCAGGCTTCAAATATTACTAATTCTATAAGCCATCAATTCAGGCCTGGAACAATGACTTCACAATCGGCTGAACTTATAT CTAAGCTTAGACTGGCACATAGTCGGGGAAGCATGTTAGGGTCGCCTCAGTCTAGCATAGCTGGTATCTCTGGGGCCAGA CAAATGCACCCTGGCCAGGCTGGTCTTTCATCAGTGTTGGGTCAGACTCTAAATAGGGCTAATATGAATACACTGCAGCG AGCGCTCGGACCTATGGGTCCACCAAAGCTGATGGCAGGGATGAATATTTATATGAATCAGCAGCAGCAGCAACATCAAC CATCTCAGCAGCAGCAACAGCAACAGCAACAGCAGATGCAATTACAACATCAGTTGCAGCAGCAATTACAGCAACAGCAG CAGCAACAGCAGCAAGAAATAAGTTCGCAATTGCAGGCAGTTGTTTCACCCCCCCAGGTGGGATCACCGTCTACCATGGG AGTTCCACCATTGAACCAGCAAACAGCGCAGCAAGCAAGCCCTCAGCAAATGAGTCAACGAACTCCGATGAGCCCACAAC AGATGAGCTCAGGGGCAATTCATGCCATGAGTACTGGTAATCCTGAAGCTTGTCCAGCGAGTCCGCAGTTGAGCTCTCAG ACCCTAGGGTCTGTTAGTAGTATGGCGAACTCCCCTATGGACATGCAAGGTGTTAATAAGAGTAATAATGCTCAATAA
Protein sequence (LotjaGi3g1v0411400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLSFKLSKSGTRYRPKPLPIPPEASHDGVSENSKSQSHLVEAGENTARMLNSSVSSETRPLAEMEASFTLNLFPDGYSI GKPFENDTASHSRYQDLPKLLHPYDRSSESLFLAIESGHLPGDILDDIPAKYVDGALICEVRDYRKCSFEKGAGIVSPES SPLVNKVCLKMSLENIVKDIPSITDKSWTYGDLMEVESKILKALKPDLHLDPAPKLERLCESSLPPKLDLRRKRLRDMPE FAVTSSNRIYGKKVCIDRVQENSNNRLVDSGITASNAIVQQSLENPAMQNHSPNIAMALRSKNLMPDSSIPGFSMPPQQS RYAMAVGNPRSLQEHGSVSAINSSGASPAAQDVMISYTDDANPSASLHSKRENQDGQASPLSNVAKRMRPASTGVDAMQQ QQIGSHVEGLQGSEINWQNTLLQQQAMARGIQYASGGIQKFPQQVFEGGLNQETGAIQFASSQQGMRLVAKEEQFEMEKL DGAEINRNKSEMGIDTVNLDPQQLRPQQRLQPNAFMKPNFSQTTWNNLAQQHMEKEAKKEDQFQKRKSVQSPRLSTGALP HSPLSSKSGEFSNGSVGPSFGGPSQLASVPAVGTPSISNDSTQRQQQAQLAAKRRSNSLPKTPAMNGVGSPASVTTGVPM NVNSPSLGTSSLVDQGVQIQNMVERFSKIEMVTMRHQLNFKKKVDDYPIQKQNTYSTQPLASHLGNAINNEGLTDEPSSL SKSLIGGSMNVCKMRVLNFCLPERVLQGNVYSLVPKLRTKMIMSEKPSDGTVSMHYGDIDEGDFVAAEDHLPTLPNTHFA DLLAEQFCSQMAREGYVREDDRVQVKPNRVNFPLGSQSSVPPNSSVGDMQQYGEQMPGQSPNEGPKPAGGSNASFNLPQN LVVNSRMLPPGNTQALQMSQGLLSGVSVAPRPQQLDPQQAVQQQQQQQHHQQQQLQPNQHSLIQQQNPQFQRSMMLGTNQ LSHLNALGQNSNMPLGNHMLNAKPSPMQMQQMLQHQQQQPQMQRKMMMGLGTAMGMGNLRNSIVGLAPLGNTMGMGSARG IGGTGISAPMTSIAGMGNMGQNPMNLGQASNITNSISHQFRPGTMTSQSAELISKLRLAHSRGSMLGSPQSSIAGISGAR QMHPGQAGLSSVLGQTLNRANMNTLQRALGPMGPPKLMAGMNIYMNQQQQQHQPSQQQQQQQQQQMQLQHQLQQQLQQQQ QQQQQEISSQLQAVVSPPQVGSPSTMGVPPLNQQTAQQASPQQMSQRTPMSPQQMSSGAIHAMSTGNPEACPASPQLSSQ TLGSVSSMANSPMDMQGVNKSNNAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 41 | 41 | - | – | |
| PANTHER | 1 | 1004 | 1004 | 4.5E-226 | – | |
| PANTHER | 1 | 1004 | 1004 | 4.5E-226 | ||
| MobiDBLite | 360 | 383 | 24 | - | – | |
| MobiDBLite | 360 | 381 | 22 | - | – | |
| MobiDBLite | 533 | 547 | 15 | - | – | |
| MobiDBLite | 533 | 642 | 110 | - | – | |
| MobiDBLite | 548 | 582 | 35 | - | – | |
| MobiDBLite | 589 | 642 | 54 | - | – | |
| MobiDBLite | 828 | 876 | 49 | - | – | |
| MobiDBLite | 830 | 858 | 29 | - | – | |
| MobiDBLite | 913 | 939 | 27 | - | – | |
| PANTHER | 1034 | 1292 | 259 | 4.5E-226 | – | |
| PANTHER | 1034 | 1292 | 259 | 4.5E-226 | ||
| Coils | 1178 | 1213 | 36 | - | – | |
| MobiDBLite | 1213 | 1305 | 93 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | SAGA complex | A SAGA-type histone acetyltransferase complex that contains Spt8 (in budding yeast) or a homolog thereof; additional polypeptides include Spt group, consisting of Spt7, Spt3, and Spt20/Ada5, which interact with the TATA-binding protein (TBP); the Ada group, consisting of Ada1, Ada2, Ada3, Ada4/Gcn5, and Ada5/Spt20, which is functionally linked to the nucleosomal HAT activity; Tra1, an ATM/PI-3 kinase-related protein that targets DNA-bound activators for recruitment to promoters; the TBP-associated factor (TAF) proteins, consisting of Taf5, Taf6, Taf9, Taf10, and Taf12, which mediate nucleosomal HAT activity and are thought to help recruit the basal transcription machinery; the ubiquitin specifc protease Ubp-8. | ||
| Molecular function | Transcription coregulator activity | A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to either activate or repress the transcription of specific genes. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class modulates interactions of DNA-binding transcription factor with other transcription coregulators. |
Expression pattern of LotjaGi3g1v0411400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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