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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023486
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.989s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0102019.1
n.a. PREDICTED: transcription initiation factor IIB-like [Fragaria vesca subsp]. vesca] gi|470137151|ref|XP_004304334.1| chr0 43335870 43339698 +
2 domain predictions
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Lj1g3v2546340.1
n.a. PREDICTED: transcription initiation factor IIB-like [Fragaria vesca subsp]. vesca] gi|470137151|ref|XP_004304334.1| chr1 29373423 29374391 -
2 domain predictions
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Lj3g3v0095850.1
n.a. PREDICTED: transcription initiation factor IIB-like [Fragaria vesca subsp]. vesca] gi|470137151|ref|XP_004304334.1| chr3 785953 789917 -
2 domain predictions
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LotjaGi1g1v0671300.1
n.a. Transcription initiation factor IIB; TAIR: AT3G10330.1 Cyclin-like family protein; Swiss-Prot: sp|P48513|TF2B_SOYBN Transcription initiation factor IIB; TrEMBL-Plants: tr|A0A151U2X6|A0A151U2X6_CAJCA Transcription initiation factor IIB; Found in the gene: LotjaGi1g1v0671300 LjG1.1_chr1 123534651 123538868 -
2 domain predictions
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LotjaGi1g1v0671300.3
n.a. Transcription initiation factor IIB; TAIR: AT3G10330.1 Cyclin-like family protein; Swiss-Prot: sp|P48513|TF2B_SOYBN Transcription initiation factor IIB; TrEMBL-Plants: tr|A0A151U2X6|A0A151U2X6_CAJCA Transcription initiation factor IIB; Found in the gene: LotjaGi1g1v0671300 LjG1.1_chr1 123535049 123538650 -
2 domain predictions
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LotjaGi5g1v0136500.1
n.a. Transcription initiation factor IIB; TAIR: AT3G10330.1 Cyclin-like family protein; Swiss-Prot: sp|Q9SS44|TF2B2_ARATH Transcription initiation factor IIB-2; TrEMBL-Plants: tr|A0A151U2X6|A0A151U2X6_CAJCA Transcription initiation factor IIB; Found in the gene: LotjaGi5g1v0136500 LjG1.1_chr5 32525642 32530434 +
2 domain predictions
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