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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023574
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.227s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0361219.1
n.a. PREDICTED: 60S ribosomal protein L4-1-like [Glycine max] gi|356548210|ref|XP_003542496.1| chr0 190265117 190267571 -
3 domain predictions
3 GO terms
Lj3g3v0565000.1
n.a. PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis sativus] gi|449450794|ref|XP_004143147.1| chr3 6277336 6279599 +
3 domain predictions
3 GO terms
Lj5g3v0615940.1
n.a. PREDICTED: 60S ribosomal protein L4-1-like [Glycine max] gi|356548210|ref|XP_003542496.1| chr5 7975094 7977393 +
3 domain predictions
3 GO terms
Lj6g3v1812050.1
n.a. PREDICTED: 50S ribosomal protein L4-like [Cicer arietinum] gi|502079211|ref|XP_004486189.1| chr6 20199840 20204565 +
3 domain predictions
3 GO terms
LotjaGi1g1v0520000.1
n.a. 60S ribosomal L4-like protein; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0520000 LjG1.1_chr1 104379457 104381914 +
3 domain predictions
3 GO terms
LotjaGi1g1v0520000.2
n.a. 60S ribosomal L4-like protein; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0520000 LjG1.1_chr1 104379480 104382510 +
3 domain predictions
3 GO terms
LotjaGi3g1v0067900.1
n.a. 50S ribosomal protein L4; TAIR: AT1G07320.1 ribosomal protein L4; Swiss-Prot: sp|O50061|RK4_ARATH 50S ribosomal protein L4, chloroplastic; TrEMBL-Plants: tr|A0A151U5D6|A0A151U5D6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0067900 LjG1.1_chr3 7405300 7408898 +
3 domain predictions
3 GO terms
LotjaGi5g1v0073200.1
n.a. 60S ribosomal protein L4; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0073200 LjG1.1_chr5 12135549 12137794 +
3 domain predictions
3 GO terms
LotjaGi5g1v0073200.2
n.a. 60S ribosomal protein L4; TAIR: AT3G09630.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1; TrEMBL-Plants: tr|A0A0S3SSP9|A0A0S3SSP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0073200 LjG1.1_chr5 12135564 12140055 +
3 domain predictions
3 GO terms
LotjaGi6g1v0290000.1
n.a. 50S ribosomal protein L4; TAIR: AT2G20060.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|B6IRQ7|RL4_RHOCS 50S ribosomal protein L4; TrEMBL-Plants: tr|I3S8B8|I3S8B8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0290000 LjG1.1_chr6 60719662 60724901 +
3 domain predictions
3 GO terms
LotjaGi6g1v0290000.2
n.a. 50S ribosomal protein L4; TAIR: AT2G20060.1 Ribosomal protein L4/L1 family; Swiss-Prot: sp|Q2RQW1|RL4_RHORT 50S ribosomal protein L4; TrEMBL-Plants: tr|I3S8B8|I3S8B8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0290000 LjG1.1_chr6 60719695 60724725 +
3 domain predictions
3 GO terms