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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023673
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.113s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0304209.1
n.a. PREDICTED: 60S ribosomal protein L10a-1-like isoform X1 [Cicer arietinum] gi|502083554|ref|XP_004487494.1| chr0 158484936 158485920 +
2 domain predictions
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Lj3g3v1182260.1
n.a. PREDICTED: 60S ribosomal protein L10a-1 [Glycine max] gi|356550103|ref|XP_003543429.1| chr3 15716630 15718918 +
2 domain predictions
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Lj3g3v3678780.1
n.a. PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine max] gi|356531651|ref|XP_003534390.1| chr3 44709904 44713548 -
2 domain predictions
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Lj6g3v0497330.1
n.a. PREDICTED: 60S ribosomal protein L10a-1 [Glycine max] gi|356550103|ref|XP_003543429.1| chr6 4921084 4923022 -
2 domain predictions
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LotjaGi2g1v0155300.2
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0155300 LjG1.1_chr2 55351895 55353263 -
2 domain predictions
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LotjaGi2g1v0158500.1
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0158500 LjG1.1_chr2 55845945 55849419 -
2 domain predictions
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LotjaGi2g1v0158500.3
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi2g1v0158500 LjG1.1_chr2 55846894 55848262 -
2 domain predictions
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LotjaGi3g1v0177000.2
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|Q8VZB9|R10A1_ARATH 60S ribosomal protein L10a-1; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi3g1v0177000 LjG1.1_chr3 24621208 24624020 +
2 domain predictions
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LotjaGi3g1v0548100.1
n.a. 50S ribosomal protein L1; TAIR: AT3G63490.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|Q9LY66|RK1_ARATH 50S ribosomal protein L1, chloroplastic; TrEMBL-Plants: tr|I1L5L1|I1L5L1_SOYBN Ribosomal protein; Found in the gene: LotjaGi3g1v0548100 LjG1.1_chr3 96492479 96496377 -
2 domain predictions
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LotjaGi6g1v0038100_LC.1
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|Q8VZB9|R10A1_ARATH 60S ribosomal protein L10a-1; TrEMBL-Plants: tr|C6SVL1|C6SVL1_SOYBN Ribosomal protein; Found in the gene: LotjaGi6g1v0038100_LC LjG1.1_chr6 7473860 7474437 -
2 domain predictions
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LotjaGi6g1v0076800.1
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800 LjG1.1_chr6 14563453 14566514 +
2 domain predictions
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LotjaGi6g1v0076800.5
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T8H5|I3T8H5_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800 LjG1.1_chr6 14563693 14565048 +
2 domain predictions
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LotjaGi6g1v0076800.6
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T625|I3T625_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800 LjG1.1_chr6 14563693 14565048 +
2 domain predictions
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LotjaGi6g1v0076800.7
n.a. Ribosomal protein; TAIR: AT1G08360.1 Ribosomal protein L1p/L10e family; Swiss-Prot: sp|B8B9K6|R10A_ORYSI 60S ribosomal protein L10a; TrEMBL-Plants: tr|I3T8H5|I3T8H5_LOTJA Ribosomal protein; Found in the gene: LotjaGi6g1v0076800 LjG1.1_chr6 14563693 14565072 +
2 domain predictions
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