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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023754
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.234s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v0404930.1
n.a. Cytochrome c oxidase assembly protein COX15-like protein [Medicago truncatula] gi|357495241|ref|XP_003617909.1| chr5 3888934 3892996 -
2 domain predictions
4 GO terms
LotjaGi1g1v0011600.1
n.a. Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr|A0A151U2K9|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi1g1v0011600 LjG1.1_chr1 1414082 1417330 -
3 domain predictions
4 GO terms
LotjaGi1g1v0011600.2
n.a. Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr|A0A151U2K9|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi1g1v0011600 LjG1.1_chr1 1414082 1417354 -
3 domain predictions
4 GO terms
LotjaGi5g1v0043500.1
n.a. Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr|A0A151U2K9|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi5g1v0043500 LjG1.1_chr5 7348992 7353495 +
3 domain predictions
4 GO terms
LotjaGi5g1v0043500.2
n.a. Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr|A0A151U2K9|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi5g1v0043500 LjG1.1_chr5 7349051 7353733 +
3 domain predictions
4 GO terms
LotjaGi5g1v0043500.3
n.a. Heme A synthase; TAIR: AT5G56090.1 cytochrome c oxidase 15; Swiss-Prot: sp|Q9FKT8|COX15_ARATH Cytochrome c oxidase assembly protein COX15; TrEMBL-Plants: tr|A0A151U2K9|A0A151U2K9_CAJCA Cytochrome c oxidase assembly protein COX15 isogeny; Found in the gene: LotjaGi5g1v0043500 LjG1.1_chr5 7349140 7353507 +
3 domain predictions
4 GO terms