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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024034
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.267s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0004949.1
n.a. ATP synthase CF1 beta subunit [Lotus japonicus] gi|13518421|ref|NP_084781.1| chr0 1862858 1863481 -
2 domain predictions
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Lj3g3v2038850.1
n.a. PREDICTED: V-type proton ATPase catalytic subunit A-like [Cicer arietinum] gi|502149512|ref|XP_004507557.1| chr3 26098928 26104930 +
2 domain predictions
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Lj4g3v1330430.1
n.a. ATP synthase CF1 beta subunit [Lotus japonicus] gi|13518421|ref|NP_084781.1| chr4 20299407 20300030 -
2 domain predictions
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Lj5g3v2169420.1
n.a. PREDICTED: ATP synthase subunit beta, mitochondrial-like [Glycine max] gi|356575611|ref|XP_003555932.1| chr5 31081266 31085432 -
2 domain predictions
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Ljchlorog3v0000060.1
n.a. ATP synthase CF1 beta subunit [Lotus japonicus] gi|13518421|ref|NP_084781.1| chloro 7413 9107 +
2 domain predictions
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LotjaGi3g1v0341700.1
n.a. ATP synthase subunit beta; TAIR: AT1G78900.1 vacuolar ATP synthase subunit A; Swiss-Prot: sp|Q9SM09|VATA_CITUN V-type proton ATPase catalytic subunit A; TrEMBL-Plants: tr|A0A072URM9|A0A072URM9_MEDTR Archaeal/vacuolar-type H+-ATPase subunit A; Found in the gene: LotjaGi3g1v0341700 LjG1.1_chr3 71650082 71656635 +
2 domain predictions
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LotjaGi4g1v0210300.1
n.a. ATP synthase subunit beta; TAIR: ATCG00480.1 ATP synthase subunit beta (ChrC); Swiss-Prot: sp|Q4VZI5|ATPB_CUCSA ATP synthase subunit beta, chloroplastic; TrEMBL-Plants: tr|M0ZKF0|M0ZKF0_SOLTU Uncharacterized protein; Found in the gene: LotjaGi4g1v0210300 LjG1.1_chr4 48883844 48885736 +
2 domain predictions
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LotjaGi4g1v0210300.2
n.a. ATP synthase subunit beta; TAIR: ATCG00480.1 ATP synthase subunit beta (ChrC); Swiss-Prot: sp|Q4VZI5|ATPB_CUCSA ATP synthase subunit beta, chloroplastic; TrEMBL-Plants: tr|M0ZKF0|M0ZKF0_SOLTU Uncharacterized protein; Found in the gene: LotjaGi4g1v0210300 LjG1.1_chr4 48884392 48885702 +
2 domain predictions
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LotjaGi5g1v0332700.1
n.a. ATP synthase subunit beta; TAIR: AT5G08680.1 ATP synthase alpha/beta family protein; Swiss-Prot: sp|P17614|ATPBM_NICPL ATP synthase subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0L9TFH9|A0A0L9TFH9_PHAAN ATP synthase subunit beta; Found in the gene: LotjaGi5g1v0332700 LjG1.1_chr5 64988530 64992794 -
2 domain predictions
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