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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024929
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.512s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0181479.1
n.a. PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max] gi|356549741|ref|XP_003543249.1| chr0 88532322 88533873 +
2 domain predictions
1 GO term
Lj4g3v1893160.1
n.a. PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max] gi|356544026|ref|XP_003540457.1| chr4 26838230 26839186 +
2 domain predictions
1 GO term
Lj5g3v0391500.1
n.a. PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max] gi|356544026|ref|XP_003540457.1| chr5 3692512 3697682 +
2 domain predictions
1 GO term
LotjaGi3g1v0330800_LC.1
n.a. GTP-binding family protein; TAIR: AT1G52980.1 GTP-binding family protein; Swiss-Prot: sp|Q9C923|NUG2_ARATH Nuclear/nucleolar GTPase 2; TrEMBL-Plants: tr|A0A151RE97|A0A151RE97_CAJCA Nucleolar GTP-binding protein 2; Found in the gene: LotjaGi3g1v0330800_LC LjG1.1_chr3 69938491 69941002 -
2 domain predictions
1 GO term
LotjaGi3g1v0330900_LC.1
n.a. GTP-binding family protein; TAIR: AT1G52980.1 GTP-binding family protein; Swiss-Prot: sp|A2XGQ1|NUG2_ORYSI Nuclear/nucleolar GTPase 2; TrEMBL-Plants: tr|A0A072V9N1|A0A072V9N1_MEDTR Nucleolar GTP-binding-like protein; Found in the gene: LotjaGi3g1v0330900_LC LjG1.1_chr3 69947233 69948728 +
2 domain predictions
1 GO term
LotjaGi5g1v0041600.1
n.a. Nucleolar GTP-binding protein 2; TAIR: AT1G52980.1 GTP-binding family protein; Swiss-Prot: sp|A2XGQ1|NUG2_ORYSI Nuclear/nucleolar GTPase 2; TrEMBL-Plants: tr|I1M3A3|I1M3A3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0041600 LjG1.1_chr5 6973150 6979305 +
2 domain predictions
1 GO term