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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024937
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.467s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0050699.1
n.a. maturase K [Lotus japonicus] gi|13518419|ref|NP_084779.1| chr0 17273006 17274532 +
2 domain predictions
1 GO term
Lj0g3v0236759.1
n.a. n.a. chr0 122687024 122696502 +
2 domain predictions
1 GO term
Lj0g3v0253549.1
n.a. Beta-ketoacyl-ACP reductase-like protein [Medicago truncatula] gi|357475583|ref|XP_003608077.1| chr0 131614377 131617464 -
2 domain predictions
1 GO term
Lj0g3v0323479.1
n.a. Intron maturase isoform 4 [Theobroma cacao] gi|508776847|gb|EOY24103.1| chr0 168906099 168908427 +
2 domain predictions
1 GO term
Lj6g3v1934110.1
n.a. Intron maturase, type II family protein [Theobroma cacao] gi|508717617|gb|EOY09514.1| chr6 22050460 22054103 +
2 domain predictions
1 GO term
Ljmitog3v0000100.1
n.a. maturase (mitochondrion) [Lotus japonicus] gi|372450292|ref|YP_005090474.1| mito 41991 48629 +
2 domain predictions
1 GO term
LotjaGi5g1v0133600.1
n.a. Maturase K; TAIR: AT5G04050.1 RNA-directed DNA polymerase (reverse transcriptase); Swiss-Prot: sp|P05511|YMC6_SCHPO Uncharacterized 91 kDa protein in cob intron; TrEMBL-Plants: tr|A0A0L9UK50|A0A0L9UK50_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0133600 LjG1.1_chr5 31395993 31399402 -
2 domain predictions
1 GO term
LotjaGi6g1v0272200.1
n.a. Maturase-like protein; TAIR: AT5G46920.1 Intron maturase, type II family protein; Swiss-Prot: sp|P38456|YMF11_MARPO Uncharacterized mitochondrial protein ymf11; TrEMBL-Plants: tr|A0A1J7H0Y5|A0A1J7H0Y5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0272200 LjG1.1_chr6 58718766 58723783 -
2 domain predictions
1 GO term
LotjaGi6g1v0272200.2
n.a. Maturase-like protein; TAIR: AT5G46920.1 Intron maturase, type II family protein; Swiss-Prot: sp|P38456|YMF11_MARPO Uncharacterized mitochondrial protein ymf11; TrEMBL-Plants: tr|A0A1J7H0Y5|A0A1J7H0Y5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0272200 LjG1.1_chr6 58721431 58723593 -
2 domain predictions
1 GO term
LotjaGi6g1v0309000.1
n.a. Maturase-like protein; TAIR: AT1G30010.1 Intron maturase, type II family protein; Swiss-Prot: sp|P38456|YMF11_MARPO Uncharacterized mitochondrial protein ymf11; TrEMBL-Plants: tr|A0A1J7HMP3|A0A1J7HMP3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0309000 LjG1.1_chr6 62624644 62628425 +
2 domain predictions
1 GO term