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IPR024937 is a Domain X.
<p>Group II introns are widespread in plant cell organelles [[cite:PUB00043292]]. In vivo, most plant group II introns do not self-splice, but require the assistance of proteinaceous splicing factors, known as maturases. In higher plants, maturases are encoded for in the nuclear genes [[cite:PUB00043293]], but are otherwise encoded by organellar introns.</p> <p>This entry represents a sequence region known as domain X, which is conserved in group II introns [[cite:PUB00004435]] and is required for maturase function [[cite:PUB00004450]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Maturase K [Lotus japonicus] gi|13518419|ref|NP_084779.1| | 10 | ||
| – | 5 | |||
| – | Beta-ketoacyl-ACP reductase-like protein [Medicago truncatula] gi|357475583|ref|XP_003608077.1| | 5 | ||
| – | Intron maturase isoform 4 [Theobroma cacao] gi|508776847|gb|EOY24103.1| | 7 | ||
| – | Intron maturase, type II family protein [Theobroma cacao] gi|508717617|gb|EOY09514.1| | 10 | ||
| – | Maturase (mitochondrion) [Lotus japonicus] gi|372450292|ref|YP_005090474.1| | 5 | ||
| – | Maturase K; TAIR: AT5G04050.1 RNA-directed DNA polymerase (reverse transcriptase); Swiss-Prot: sp|P05511|YMC6_SCHPO Uncharacterized 91 kDa protein in cob intron; TrEMBL-Plants: tr|A0A0L9UK50|A0A0L9UK50_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0133600 | 8 | ||
| – | Maturase-like protein; TAIR: AT5G46920.1 Intron maturase, type II family protein; Swiss-Prot: sp|P38456|YMF11_MARPO Uncharacterized mitochondrial protein ymf11; TrEMBL-Plants: tr|A0A1J7H0Y5|A0A1J7H0Y5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0272200 | 15 | ||
| – | Maturase-like protein; TAIR: AT5G46920.1 Intron maturase, type II family protein; Swiss-Prot: sp|P38456|YMF11_MARPO Uncharacterized mitochondrial protein ymf11; TrEMBL-Plants: tr|A0A1J7H0Y5|A0A1J7H0Y5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0272200 | 15 | ||
| – | Maturase-like protein; TAIR: AT1G30010.1 Intron maturase, type II family protein; Swiss-Prot: sp|P38456|YMF11_MARPO Uncharacterized mitochondrial protein ymf11; TrEMBL-Plants: tr|A0A1J7HMP3|A0A1J7HMP3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0309000 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 10.00 |