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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025287
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 110 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.496s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0009919.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X1 [Cicer arietinum] gi|502123880|ref|XP_004498296.1| chr0 4086106 4086900 +
2 domain predictions
1 GO term
Lj0g3v0069349.1
n.a. PREDICTED: wall-associated receptor kinase-like 8-like [Glycine max] gi|356532447|ref|XP_003534784.1| chr0 25034120 25036247 +
2 domain predictions
1 GO term
Lj0g3v0084019.1
n.a. PREDICTED: wall-associated receptor kinase 3-like [Glycine max] gi|356518585|ref|XP_003527959.1| chr0 33421371 33422413 +
2 domain predictions
1 GO term
Lj0g3v0090919.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120-like isoform X1 [Cicer arietinum] gi|502124346|ref|XP_004498487.1| chr0 37590076 37591309 +
2 domain predictions
1 GO term
Lj0g3v0090929.1
n.a. n.a. chr0 37590076 37593037 -
2 domain predictions
1 GO term
Lj0g3v0101359.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508773502|gb|EOY20758.1| chr0 43002848 43004421 +
2 domain predictions
1 GO term
Lj0g3v0189099.1
n.a. PREDICTED: wall-associated receptor kinase 2-like [Glycine max] gi|356554691|ref|XP_003545677.1| chr0 92469263 92469792 -
2 domain predictions
1 GO term
Lj0g3v0202799.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502124180|ref|XP_004498419.1| chr0 100410719 100411619 -
2 domain predictions
1 GO term
Lj0g3v0236099.1
n.a. n.a. chr0 122369939 122371797 +
2 domain predictions
1 GO term
Lj0g3v0236109.1
n.a. PREDICTED: wall-associated receptor kinase-like 8-like [Glycine max] gi|356532447|ref|XP_003534784.1| chr0 122369939 122371678 -
2 domain predictions
1 GO term
Lj0g3v0257919.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502123870|ref|XP_004498292.1| chr0 133912738 133915391 -
2 domain predictions
1 GO term
Lj0g3v0257929.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 133915895 133916912 +
2 domain predictions
1 GO term
Lj0g3v0275209.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124155|ref|XP_004498409.1| chr0 142749560 142753392 -
2 domain predictions
1 GO term
Lj0g3v0275219.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera] gi|359490131|ref|XP_002279967.2| chr0 142753684 142755758 +
2 domain predictions
1 GO term
Lj0g3v0275229.3
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142761799 -
2 domain predictions
1 GO term
Lj0g3v0275229.4
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142761799 -
2 domain predictions
1 GO term
Lj0g3v0275399.1
n.a. PREDICTED: wall-associated receptor kinase-like 8-like [Glycine max] gi|356532447|ref|XP_003534784.1| chr0 142838478 142839330 -
2 domain predictions
1 GO term
Lj0g3v0275409.1
n.a. n.a. chr0 142838478 142845948 +
2 domain predictions
1 GO term
Lj0g3v0290889.1
n.a. PREDICTED: wall-associated receptor kinase 2-like [Glycine max] gi|356554681|ref|XP_003545672.1| chr0 150991874 150995211 +
2 domain predictions
1 GO term
Lj0g3v0294819.3
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502124177|ref|XP_004498418.1| chr0 153261726 153264510 -
2 domain predictions
1 GO term
Lj0g3v0294819.4
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502124180|ref|XP_004498419.1| chr0 153263003 153264510 -
2 domain predictions
1 GO term
Lj0g3v0312599.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X3 [Cicer arietinum] gi|502163640|ref|XP_004512901.1| chr0 163218869 163223681 -
2 domain predictions
1 GO term
Lj0g3v0312609.1
n.a. Kinase superfamily protein [Theobroma cacao] gi|508773823|gb|EOY21079.1| chr0 163226851 163228979 -
2 domain predictions
1 GO term
Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
2 domain predictions
1 GO term
Lj0g3v0364369.1
n.a. protein kinase-related protein precursor [Glycine max] gi|351725755|ref|NP_001235056.1| chr0 192264519 192268730 -
2 domain predictions
1 GO term
Lj1g3v0267460.1
n.a. PREDICTED: wall-associated receptor kinase 3-like [Glycine max] gi|356554683|ref|XP_003545673.1| chr1 2917576 2918488 -
2 domain predictions
1 GO term
Lj1g3v0899920.1
n.a. PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 2-like [Cicer arietinum] gi|502136069|ref|XP_004502549.1| chr1 11477187 11478813 +
2 domain predictions
1 GO term
Lj1g3v3443870.1
n.a. PREDICTED: wall-associated receptor kinase-like 20-like [Cicer arietinum] gi|502102179|ref|XP_004491993.1| chr1 39855926 39857020 -
2 domain predictions
1 GO term
Lj1g3v3767170.1
n.a. PREDICTED: wall-associated receptor kinase 5-like [Glycine max] gi|356551203|ref|XP_003543967.1| chr1 43241329 43244541 +
2 domain predictions
1 GO term
Lj1g3v3974820.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124170|ref|XP_004498415.1| chr1 46607072 46610132 +
2 domain predictions
1 GO term
Lj1g3v3974840.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124167|ref|XP_004498414.1| chr1 46612963 46616250 -
2 domain predictions
1 GO term
Lj1g3v4691720.1
n.a. PREDICTED: wall-associated receptor kinase-like 20-like [Glycine max] gi|356570800|ref|XP_003553572.1| chr1 55638063 55640546 -
2 domain predictions
1 GO term
Lj1g3v4765190.1
n.a. PREDICTED: wall-associated receptor kinase-like 20-like [Cicer arietinum] gi|502113163|ref|XP_004494561.1| chr1 57501601 57502737 +
2 domain predictions
1 GO term
Lj2g3v1349490.1
n.a. Wall-associated receptor kinase-like protein [Medicago truncatula] gi|357486413|ref|XP_003613494.1| chr2 21279473 21282876 +
2 domain predictions
1 GO term
Lj2g3v1349490.2
n.a. Wall-associated receptor kinase-like protein [Medicago truncatula] gi|357486413|ref|XP_003613494.1| chr2 21279473 21280711 +
2 domain predictions
1 GO term
Lj2g3v1499260.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr2 23729150 23732999 -
2 domain predictions
1 GO term
Lj2g3v1499260.2
n.a. Stress-induced receptor-like kinase [Medicago truncatula] gi|357438733|ref|XP_003589643.1| chr2 23731632 23732999 -
2 domain predictions
1 GO term
Lj2g3v1499270.1
n.a. Stress-induced receptor-like kinase [Medicago truncatula] gi|357438733|ref|XP_003589643.1| chr2 23731968 23732999 -
2 domain predictions
1 GO term
Lj2g3v1499280.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357438749|ref|XP_003589651.1| chr2 23733643 23736008 +
2 domain predictions
1 GO term
Lj3g3v2441830.1
n.a. RING finger protein [Medicago truncatula] gi|358349275|ref|XP_003638664.1| chr3 30100507 30104985 -
2 domain predictions
1 GO term
Lj3g3v2519980.1
n.a. PREDICTED: probably inactive receptor-like protein kinase At2g46850-like [Cicer arietinum] gi|502156721|ref|XP_004510614.1| chr3 30948723 30953113 +
2 domain predictions
1 GO term
Lj3g3v2888290.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max] gi|356544860|ref|XP_003540865.1| chr3 35706091 35711245 +
2 domain predictions
1 GO term
Lj4g3v0867570.1
n.a. PREDICTED: wall-associated receptor kinase-like 14-like [Glycine max] gi|356559444|ref|XP_003548009.1| chr4 13184189 13188533 +
2 domain predictions
1 GO term
Lj4g3v2250210.1
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508714975|gb|EOY06872.1| chr4 31091189 31092711 -
2 domain predictions
1 GO term
Lj4g3v2412600.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g18390-like [Cicer arietinum] gi|502141658|ref|XP_004504581.1| chr4 33492878 33496712 -
2 domain predictions
1 GO term
Lj4g3v3004070.1
n.a. PREDICTED: RING-H2 finger protein ATL22-like [Cicer arietinum] gi|502139031|ref|XP_004503620.1| chr4 39858828 39861153 +
2 domain predictions
1 GO term
Lj4g3v3004080.1
n.a. PREDICTED: RING-H2 finger protein ATL22-like [Cicer arietinum] gi|502139031|ref|XP_004503620.1| chr4 39863039 39866062 +
2 domain predictions
1 GO term
Lj4g3v3099610.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356511307|ref|XP_003524368.1| chr4 41336993 41341312 +
2 domain predictions
1 GO term
Lj5g3v2182400.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g18390-like [Glycine max] gi|356530724|ref|XP_003533930.1| chr5 31560931 31567878 +
2 domain predictions
1 GO term
Lj5g3v2182480.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357444689|ref|XP_003592622.1| chr5 31596816 31599618 +
2 domain predictions
1 GO term