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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3099610 |
| Transcript ID | Lj4g3v3099610.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356511307|ref|XP_003524368.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| PANTHER | 4 | 664 | 661 | 0 | – | |
| PANTHER | 4 | 664 | 661 | 0 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| Phobius | 23 | 27 | 5 | – | – | |
| Phobius | 28 | 260 | 233 | – | – | |
| Pfam | 40 | 138 | 99 | 1.20E-10 | ||
| Pfam | 150 | 244 | 95 | 7.10E-15 | ||
| TMHMM | 261 | 283 | 23 | – | – | |
| Phobius | 261 | 284 | 24 | – | – | |
| Phobius | 285 | 665 | 381 | – | – | |
| Gene3D | 301 | 408 | 108 | 3.40E-24 | – | |
| SUPERFAMILY | 320 | 642 | 323 | 1.35E-72 | ||
| SMART | 333 | 612 | 280 | 6.70E-31 | ||
| ProSiteProfiles | 333 | 619 | 287 | 37.997 | ||
| Pfam | 336 | 609 | 274 | 8.10E-48 | ||
| ProSitePatterns | 339 | 362 | 24 | – | ||
| CDD | 339 | 614 | 276 | 4.05E-84 | – | |
| Gene3D | 409 | 632 | 224 | 7.70E-44 | – | |
| ProSitePatterns | 460 | 472 | 13 | – | ||
| MobiDBLite | 619 | 645 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Polysaccharide binding | Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. |
Expression pattern of Lj4g3v3099610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3099610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.