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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025564
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.305s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0300909.1
n.a. PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic-like isoform X2 [Cicer arietinum] gi|502147587|ref|XP_004506839.1| chr0 156385777 156388343 +
2 domain predictions
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Lj0g3v0300909.3
n.a. PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic-like isoform X2 [Cicer arietinum] gi|502147587|ref|XP_004506839.1| chr0 156386011 156388343 +
2 domain predictions
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Lj1g3v5060720.1
n.a. PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic-like isoform X1 [Cicer arietinum] gi|502114139|ref|XP_004494874.1| chr1 61895524 61897121 +
2 domain predictions
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Lj3g3v2364190.1
n.a. Uncharacterized protein TCM_005215 [Theobroma cacao] gi|508703907|gb|EOX95803.1| chr3 29624199 29626608 +
2 domain predictions
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LotjaGi1g1v0797100.1
n.a. Protein curvature thylakoid chloroplastic-like; TAIR: AT2G46820.1 photosystem I P subunit; Swiss-Prot: sp|Q8LCA1|CUT1B_ARATH Protein CURVATURE THYLAKOID 1B, chloroplastic; TrEMBL-Plants: tr|I3SDA7|I3SDA7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0797100 LjG1.1_chr1 136752910 136758116 +
2 domain predictions
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LotjaGi2g1v0326400.1
n.a. Protein curvature thylakoid chloroplastic-like; TAIR: AT4G38100.1 CURVATURE THYLAKOID 1D-like protein; Swiss-Prot: sp|Q8LDD3|CUT1D_ARATH Protein CURVATURE THYLAKOID 1D, chloroplastic; TrEMBL-Plants: tr|I3SMM9|I3SMM9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0326400 LjG1.1_chr2 80182742 80187307 +
2 domain predictions
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LotjaGi3g1v0367000.1
n.a. Protein curvature thylakoid chloroplastic-like; TAIR: AT1G52220.1 CURVATURE THYLAKOID protein; Swiss-Prot: sp|Q9M812|CUT1C_ARATH Protein CURVATURE THYLAKOID 1C, chloroplastic; TrEMBL-Plants: tr|I3S8Y9|I3S8Y9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0367000 LjG1.1_chr3 75314309 75317569 +
2 domain predictions
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LotjaGi3g1v0404500.1
n.a. Protein curvature thylakoid chloroplastic-like; TAIR: AT2G46820.1 photosystem I P subunit; Swiss-Prot: sp|Q8LCA1|CUT1B_ARATH Protein CURVATURE THYLAKOID 1B, chloroplastic; TrEMBL-Plants: tr|I3SY72|I3SY72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0404500 LjG1.1_chr3 80708591 80712323 -
2 domain predictions
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