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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300909 |
| Transcript ID | Lj0g3v0300909.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic-like isoform X2 [Cicer arietinum] gi|502147587|ref|XP_004506839.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 105 | 105 | – | – | |
| PANTHER | 35 | 178 | 144 | 6.20E-70 | ||
| PANTHER | 35 | 178 | 144 | 6.20E-70 | – | |
| Pfam | 93 | 177 | 85 | 3.30E-29 | ||
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 106 | 126 | 21 | – | – | |
| Phobius | 127 | 131 | 5 | – | – | |
| Phobius | 132 | 152 | 21 | – | – | |
| TMHMM | 138 | 157 | 20 | – | – | |
| Phobius | 153 | 178 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Thylakoid | A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation. |
Expression pattern of Lj0g3v0300909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300909.1, powered by CORGI.
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