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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026971
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.937s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0345269.1
n.a. PREDICTED: condensin complex subunit 1-like [Cicer arietinum] gi|502169956|ref|XP_004514724.1| chr0 181140876 181150618 +
2 domain predictions
1 GO term
Lj6g3v1450720.1
n.a. PREDICTED: condensin-2 complex subunit D3-like [Glycine max] gi|356529537|ref|XP_003533347.1| chr6 17123075 17129749 +
2 domain predictions
1 GO term
Lj6g3v1707240.1
n.a. PREDICTED: condensin-2 complex subunit D3-like [Glycine max] gi|356558165|ref|XP_003547378.1| chr6 19306412 19312948 +
2 domain predictions
1 GO term
Lj6g3v1707240.2
n.a. PREDICTED: condensin-2 complex subunit D3-like [Cicer arietinum] gi|502085130|ref|XP_004487844.1| chr6 19311023 19312948 +
2 domain predictions
1 GO term
LotjaGi5g1v0133400.1
n.a. Condensin complex subunit 1; TAIR: AT3G57060.1 binding protein; Swiss-Prot: sp|Q8K2Z4|CND1_MOUSE Condensin complex subunit 1; TrEMBL-Plants: tr|A0A072VHH5|A0A072VHH5_MEDTR Condensin complex subunit 1; Found in the gene: LotjaGi5g1v0133400 LjG1.1_chr5 31318101 31345292 -
2 domain predictions
1 GO term
LotjaGi6g1v0281200.1
n.a. Condensin-2 complex subunit D3; TAIR: AT4G15890.1 binding protein; Swiss-Prot: sp|Q6ZQK0|CNDD3_MOUSE Condensin-2 complex subunit D3; TrEMBL-Plants: tr|A0A0R0G114|A0A0R0G114_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0281200 LjG1.1_chr6 59761223 59767899 +
2 domain predictions
1 GO term