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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0345269 |
| Transcript ID | Lj0g3v0345269.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: condensin complex subunit 1-like [Cicer arietinum] gi|502169956|ref|XP_004514724.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 1324 | 1324 | 0 | – | |
| PANTHER | 1 | 1324 | 1324 | 0 | ||
| PIRSF | 1 | 1288 | 1288 | 0 | ||
| Pfam | 81 | 244 | 164 | 1.00E-42 | ||
| SUPERFAMILY | 137 | 184 | 48 | 2.74E-49 | ||
| SUPERFAMILY | 290 | 448 | 159 | 2.74E-49 | ||
| Gene3D | 373 | 442 | 70 | 1.10E-24 | ||
| Coils | 453 | 473 | 21 | – | – | |
| Gene3D | 540 | 632 | 93 | 1.10E-24 | ||
| SUPERFAMILY | 546 | 623 | 78 | 2.74E-49 | ||
| SUPERFAMILY | 662 | 806 | 145 | 2.74E-49 | ||
| Coils | 846 | 866 | 21 | – | – | |
| MobiDBLite | 855 | 877 | 23 | – | – | |
| SUPERFAMILY | 910 | 1131 | 222 | 2.74E-49 | ||
| Gene3D | 933 | 1140 | 208 | 1.10E-24 | ||
| Pfam | 978 | 1137 | 160 | 2.20E-51 | ||
| SUPERFAMILY | 1165 | 1197 | 33 | 2.74E-49 | ||
| Gene3D | 1178 | 1202 | 25 | 1.10E-24 | ||
| Coils | 1188 | 1208 | 21 | – | – | |
| MobiDBLite | 1204 | 1330 | 127 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitotic cell cycle | Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Mitotic chromosome condensation | The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. | ||
| Biological process | Chromosome condensation | The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. |
Expression pattern of Lj0g3v0345269.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0345269.1, powered by CORGI.
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