Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR026971 is a Condensin subunit 1/Condensin-2 complex subunit D3.
<p>This entry includes condensin subunit 1 (CND1) and condensin-2 complex subunit D3 (NCAPD3).</p> <p>CND1 is a regulatory subunit of the condensin complex (contains the SMC2 and SMC4 heterodimer, and three non SMC subunits that probably regulate the complex: NCAPH/BRRN1, NCAPD2/CAPD2 and NCAPG), a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes [[cite:PUB00007177]]. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases [[cite:PUB00062096], [cite:PUB00010072], [cite:PUB00062097], [cite:PUB00100765]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitotic chromosome condensation | The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: condensin complex subunit 1-like [Cicer arietinum] gi|502169956|ref|XP_004514724.1| | 15 | ||
| – | PREDICTED: condensin-2 complex subunit D3-like [Glycine max] gi|356529537|ref|XP_003533347.1| | 11 | ||
| – | PREDICTED: condensin-2 complex subunit D3-like [Glycine max] gi|356558165|ref|XP_003547378.1| | 9 | ||
| – | PREDICTED: condensin-2 complex subunit D3-like [Cicer arietinum] gi|502085130|ref|XP_004487844.1| | 9 | ||
| – | Condensin complex subunit 1; TAIR: AT3G57060.1 binding protein; Swiss-Prot: sp|Q8K2Z4|CND1_MOUSE Condensin complex subunit 1; TrEMBL-Plants: tr|A0A072VHH5|A0A072VHH5_MEDTR Condensin complex subunit 1; Found in the gene: LotjaGi5g1v0133400 | 15 | ||
| – | Condensin-2 complex subunit D3; TAIR: AT4G15890.1 binding protein; Swiss-Prot: sp|Q6ZQK0|CNDD3_MOUSE Condensin-2 complex subunit D3; TrEMBL-Plants: tr|A0A0R0G114|A0A0R0G114_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0281200 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 16.67 |