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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027097
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 9.289s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0099800.1
n.a. Mitotic spindle checkpoint protein MAD2; TAIR: AT3G25980.1 DNA-binding HORMA family protein; Swiss-Prot: sp|Q9LU93|MAD2_ARATH Mitotic spindle checkpoint protein MAD2; TrEMBL-Plants: tr|A0A151QV91|A0A151QV91_CAJCA Mitotic spindle checkpoint protein MAD2; Found in the gene: LotjaGi6g1v0099800 LjG1.1_chr6 21672585 21675137 +
2 domain predictions
1 GO term
LotjaGi6g1v0099800.2
n.a. Mitotic spindle checkpoint protein MAD2; TAIR: AT3G25980.1 DNA-binding HORMA family protein; Swiss-Prot: sp|Q9LU93|MAD2_ARATH Mitotic spindle checkpoint protein MAD2; TrEMBL-Plants: tr|A0A151QV91|A0A151QV91_CAJCA Mitotic spindle checkpoint protein MAD2; Found in the gene: LotjaGi6g1v0099800 LjG1.1_chr6 21672652 21674797 +
2 domain predictions
1 GO term
LotjaGi6g1v0099800.3
n.a. Mitotic spindle checkpoint protein MAD2; TAIR: AT3G25980.1 DNA-binding HORMA family protein; Swiss-Prot: sp|Q9LU93|MAD2_ARATH Mitotic spindle checkpoint protein MAD2; TrEMBL-Plants: tr|A0A151QV91|A0A151QV91_CAJCA Mitotic spindle checkpoint protein MAD2; Found in the gene: LotjaGi6g1v0099800 LjG1.1_chr6 21672673 21674972 +
2 domain predictions
1 GO term
LotjaGi6g1v0099800.4
n.a. Mitotic spindle checkpoint protein MAD2; TAIR: AT3G25980.1 DNA-binding HORMA family protein; Swiss-Prot: sp|Q9LU93|MAD2_ARATH Mitotic spindle checkpoint protein MAD2; TrEMBL-Plants: tr|A0A151QV91|A0A151QV91_CAJCA Mitotic spindle checkpoint protein MAD2; Found in the gene: LotjaGi6g1v0099800 LjG1.1_chr6 21672782 21674244 +
2 domain predictions
1 GO term