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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR030380
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.947s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0004549.1
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Glycine max] gi|356511676|ref|XP_003524549.1| chr0 1668607 1678184 +
2 domain predictions
1 GO term
Lj0g3v0004569.1
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like, partial [Solanum lycopersicum] gi|460415896|ref|XP_004253289.1| chr0 1677825 1678184 +
2 domain predictions
1 GO term
Lj2g3v1451840.1
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Glycine max] gi|356511676|ref|XP_003524549.1| chr2 22827216 22830493 -
2 domain predictions
1 GO term
Lj4g3v2250350.2
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like isoform X1 [Cicer arietinum] gi|502150738|ref|XP_004508099.1| chr4 31118001 31129015 +
2 domain predictions
1 GO term
Lj4g3v2250360.1
n.a. PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like [Glycine max] gi|356519874|ref|XP_003528594.1| chr4 31125046 31129752 +
2 domain predictions
1 GO term
LotjaGi2g1v0244100.1
n.a. DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|I1K1I2|I1K1I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244100 LjG1.1_chr2 70774419 70792987 -
2 domain predictions
1 GO term
LotjaGi2g1v0244100.2
n.a. DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|I1K1I2|I1K1I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244100 LjG1.1_chr2 70774601 70793007 -
2 domain predictions
1 GO term
LotjaGi2g1v0321400_LC.1
n.a. DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|K7K692|K7K692_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0321400_LC LjG1.1_chr2 79621487 79628187 +
2 domain predictions
1 GO term
LotjaGi3g1v0172800.1
n.a. DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|I1K1I2|I1K1I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0172800 LjG1.1_chr3 23885180 23900326 -
2 domain predictions
1 GO term
LotjaGi4g1v0335100.1
n.a. DNA (Cytosine-5-)-methyltransferase; TAIR: AT3G17310.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8H1E8|DRM3_ARATH Probable inactive DNA (cytosine-5)-methyltransferase DRM3; TrEMBL-Plants: tr|K7MJU2|K7MJU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0335100 LjG1.1_chr4 71518554 71527253 +
2 domain predictions
1 GO term