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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033130
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.990s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1277800.1
n.a. LCR-like protein [Medicago truncatula] gi|357487015|ref|XP_003613795.1| chr2 20463586 20464988 -
2 domain predictions
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Lj2g3v1277810.1
n.a. PREDICTED: extracellular ribonuclease LE-like [Glycine max] gi|356499815|ref|XP_003518732.1| chr2 20467335 20469342 -
2 domain predictions
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Lj3g3v2921110.1
n.a. PREDICTED: ribonuclease 2-like [Glycine max] gi|356520310|ref|XP_003528806.1| chr3 36451904 36452640 -
2 domain predictions
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LotjaGi2g1v0076800_LC.1
n.a. S-RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0076800_LC LjG1.1_chr2 20562088 20566463 +
2 domain predictions
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LotjaGi2g1v0302900.1
n.a. Ribonuclease; TAIR: AT1G14220.1 Ribonuclease T2 family protein; Swiss-Prot: sp|P42815|RNS3_ARATH Ribonuclease 3; TrEMBL-Plants: tr|I3SNB3|I3SNB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0302900 LjG1.1_chr2 77691169 77693472 -
2 domain predictions
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LotjaGi2g1v0303000.1
n.a. Ribonuclease; TAIR: AT2G02990.1 ribonuclease 1; Swiss-Prot: sp|P42813|RNS1_ARATH Ribonuclease 1; TrEMBL-Plants: tr|A0A1J7HE99|A0A1J7HE99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0303000 LjG1.1_chr2 77695481 77697570 -
2 domain predictions
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LotjaGi3g1v0469000.1
n.a. Ribonuclease; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469000 LjG1.1_chr3 88453729 88455074 -
2 domain predictions
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LotjaGi3g1v0469000.2
n.a. Ribonuclease; TAIR: AT1G26820.1 ribonuclease 3; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469000 LjG1.1_chr3 88453729 88455074 -
2 domain predictions
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