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IPR033130

Description

IPR033130 is a Ribonuclease T2, His active site 2.

<p>The fungal ribonucleases T2 from Aspergillus oryzae, M from Aspergillus saitoi and Rh from Rhizopeus niveus are structurally and functionally related 30 Kd glycoproteins [[cite:PUB00002342]] that cleave the 3'-5' internucleotide linkage of RNA via a nucleotide 2',3'-cyclic phosphate intermediates ([ec:3.1.27.1]).</p> <p>A number of other RNAses have been found to be evolutionary related to these fungal enzymes:</p> <ul> <li>Self-incompatibility [[cite:PUB00005134]] in flowering plants is often controlled by a single gene (S-gene) that has several alleles. This gene prevents fertilization by self-pollen or by pollen bearing either of the two S- alleles expressed in the style. The self-incompatibility glycoprotein from several higher plants of the solanaceae family has been shown [[cite:PUB00005134], [cite:PUB00004051]] to be a ribonuclease.</li> <li>Phosphate-starvation induced RNAses LE and LX from tomato [[cite:PUB00001441]]. These two enzymes are probably involved in a phosphate-starvation rescue system.</li> <li>Escherichia coli periplasmic RNAse I (EC 3.1.27.6) (gene rna) [[cite:PUB00001796]].</li> <li>Aeromonas hydrophila periplasmic RNAse.</li> <li>Haemophilus influenzae hypothetical protein HI0526.</li> </ul> <p>Two histidines residues have been shown [[cite:PUB00001381], [cite:PUB00001640]] to be involved in the catalytic mechanism of RNase T2 and Rh. These residues and the region around them are highly conserved.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
LCR-like protein [Medicago truncatula] gi|357487015|ref|XP_003613795.1| 18
PREDICTED: extracellular ribonuclease LE-like [Glycine max] gi|356499815|ref|XP_003518732.1| 18
PREDICTED: ribonuclease 2-like [Glycine max] gi|356520310|ref|XP_003528806.1| 11
S-RNase; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0076800_LC 8
Ribonuclease; TAIR: AT1G14220.1 Ribonuclease T2 family protein; Swiss-Prot: sp|P42815|RNS3_ARATH Ribonuclease 3; TrEMBL-Plants: tr|I3SNB3|I3SNB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0302900 19
Ribonuclease; TAIR: AT2G02990.1 ribonuclease 1; Swiss-Prot: sp|P42813|RNS1_ARATH Ribonuclease 1; TrEMBL-Plants: tr|A0A1J7HE99|A0A1J7HE99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0303000 19
Ribonuclease; TAIR: AT2G39780.1 ribonuclease 2; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469000 18
Ribonuclease; TAIR: AT1G26820.1 ribonuclease 3; Swiss-Prot: sp|P42814|RNS2_ARATH Ribonuclease 2; TrEMBL-Plants: tr|I3SAC9|I3SAC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469000 19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd01061 CDD 1 12.50