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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033138
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 59 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.753s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0125739.1
n.a. PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| chr0 56514173 56515919 +
2 domain predictions
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Lj0g3v0131919.1
n.a. PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| chr0 60152624 60153264 -
2 domain predictions
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Lj0g3v0285709.1
n.a. PREDICTED: laccase-5-like [Glycine max] gi|356540011|ref|XP_003538485.1| chr0 148334877 148339191 -
2 domain predictions
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Lj0g3v0316509.1
n.a. PREDICTED: laccase-8-like [Cicer arietinum] gi|502103902|ref|XP_004492390.1| chr0 165313971 165319828 -
2 domain predictions
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Lj0g3v0351459.1
n.a. PREDICTED: laccase-4-like [Glycine max] gi|356506772|ref|XP_003522150.1| chr0 184799217 184803765 +
2 domain predictions
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Lj1g3v3444130.1
n.a. PREDICTED: laccase-17-like [Cicer arietinum] gi|502103605|ref|XP_004492322.1| chr1 39926598 39930021 -
2 domain predictions
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Lj1g3v3458760.1
n.a. PREDICTED: laccase-17-like [Glycine max] gi|356527433|ref|XP_003532315.1| chr1 40159495 40164677 +
2 domain predictions
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Lj1g3v3458800.1
n.a. PREDICTED: laccase-17-like [Cicer arietinum] gi|502103605|ref|XP_004492322.1| chr1 40175731 40178691 +
2 domain predictions
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Lj1g3v4139440.1
n.a. Laccase [Medicago truncatula] gi|357492551|ref|XP_003616564.1| chr1 49013183 49016727 +
2 domain predictions
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Lj2g3v0690110.1
n.a. n.a. chr2 10922300 10924410 -
2 domain predictions
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Lj2g3v1734800.1
n.a. PREDICTED: laccase-11-like [Glycine max] gi|356496745|ref|XP_003517226.1| chr2 26827571 26831690 -
2 domain predictions
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Lj2g3v1734800.2
n.a. PREDICTED: laccase-11-like [Glycine max] gi|356495402|ref|XP_003516567.1| chr2 26834182 26837356 -
2 domain predictions
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Lj2g3v2136010.1
n.a. ascorbate oxidase [Lotus japonicus] gi|400001046|gb|AFP65861.1| chr2 32352688 32356363 -
2 domain predictions
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Lj2g3v2833010.1
n.a. PREDICTED: laccase-5-like [Glycine max] gi|356551363|ref|XP_003544045.1| chr2 36960983 36964170 -
2 domain predictions
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Lj3g3v2477620.1
n.a. PREDICTED: laccase-6-like [Glycine max] gi|356522496|ref|XP_003529882.1| chr3 30407802 30412545 +
2 domain predictions
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Lj3g3v2679640.1
n.a. PREDICTED: laccase-4-like [Glycine max] gi|356498932|ref|XP_003518300.1| chr3 32623810 32629215 -
2 domain predictions
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Lj4g3v2817870.1
n.a. PREDICTED: L-ascorbate oxidase-like [Cicer arietinum] gi|502140076|ref|XP_004504046.1| chr4 37568674 37571964 -
2 domain predictions
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Lj4g3v3114580.1
n.a. PREDICTED: laccase-1-like [Fragaria vesca subsp]. vesca] gi|470130735|ref|XP_004301258.1| chr4 42019837 42023063 -
2 domain predictions
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Lj5g3v1874160.1
n.a. PREDICTED: LOW QUALITY PROTEIN: laccase-14-like [Vitis vinifera] gi|359495131|ref|XP_003634921.1| chr5 26830207 26830606 +
2 domain predictions
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Lj5g3v1886260.1
n.a. PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| chr5 26874554 26877577 +
2 domain predictions
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Lj5g3v1887360.1
n.a. PREDICTED: laccase-14-like [Solanum lycopersicum] gi|460384303|ref|XP_004237852.1| chr5 26900011 26911508 -
2 domain predictions
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Lj6g3v0607060.1
n.a. PREDICTED: laccase-4-like [Glycine max] gi|356566153|ref|XP_003551299.1| chr6 5972108 5975707 +
2 domain predictions
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Lj6g3v1028660.1
n.a. PREDICTED: L-ascorbate oxidase [Glycine max] gi|356575058|ref|XP_003555659.1| chr6 11467429 11473327 +
2 domain predictions
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LotjaGi1g1v0073600.1
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|A0A0S3RKD8|A0A0S3RKD8_PHAAN Laccase; Found in the gene: LotjaGi1g1v0073600 LjG1.1_chr1 10583627 10586838 +
2 domain predictions
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LotjaGi1g1v0073600.2
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|V7B764|V7B764_PHAVU Laccase; Found in the gene: LotjaGi1g1v0073600 LjG1.1_chr1 10584045 10586529 +
2 domain predictions
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LotjaGi1g1v0081300.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 LjG1.1_chr1 11775299 11779100 -
2 domain predictions
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LotjaGi1g1v0081300.2
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 LjG1.1_chr1 11775683 11778473 -
2 domain predictions
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LotjaGi1g1v0114400.1
n.a. Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|I1JHH8|I1JHH8_SOYBN Laccase; Found in the gene: LotjaGi1g1v0114400 LjG1.1_chr1 17994349 17998701 +
2 domain predictions
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LotjaGi1g1v0114400.2
n.a. Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|G7JZP3|G7JZP3_MEDTR Laccase; Found in the gene: LotjaGi1g1v0114400 LjG1.1_chr1 17994717 17998285 +
2 domain predictions
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LotjaGi1g1v0123400.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1JHB0|I1JHB0_SOYBN Laccase; Found in the gene: LotjaGi1g1v0123400 LjG1.1_chr1 19590354 19595836 -
2 domain predictions
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LotjaGi1g1v0123400.2
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|G7KE42|G7KE42_MEDTR Laccase; Found in the gene: LotjaGi1g1v0123400 LjG1.1_chr1 19590799 19593819 -
2 domain predictions
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LotjaGi1g1v0133700.1
n.a. L-ascorbate oxidase; TAIR: AT5G21105.1 Plant L-ascorbate oxidase; Swiss-Prot: sp|P14133|ASO_CUCSA L-ascorbate oxidase; TrEMBL-Plants: tr|J7GBJ3|J7GBJ3_LOTJA Ascorbate oxidase; Found in the gene: LotjaGi1g1v0133700 LjG1.1_chr1 21505384 21514291 +
2 domain predictions
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LotjaGi1g1v0218900.1
n.a. Laccase; TAIR: AT5G01040.1 laccase 8; Swiss-Prot: sp|Q9LFD2|LAC8_ARATH Laccase-8; TrEMBL-Plants: tr|A0A072U0V9|A0A072U0V9_MEDTR Laccase; Found in the gene: LotjaGi1g1v0218900 LjG1.1_chr1 48487254 48495551 -
2 domain predictions
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LotjaGi1g1v0579400.1
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0579400 LjG1.1_chr1 111893240 111896984 -
2 domain predictions
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LotjaGi1g1v0582000.1
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A151QZC4|A0A151QZC4_CAJCA Laccase-17; Found in the gene: LotjaGi1g1v0582000 LjG1.1_chr1 112135679 112140955 +
2 domain predictions
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LotjaGi1g1v0582000.2
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|I1KZE6|I1KZE6_SOYBN Laccase; Found in the gene: LotjaGi1g1v0582000 LjG1.1_chr1 112135679 112140955 +
2 domain predictions
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LotjaGi1g1v0582200.1
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0582200 LjG1.1_chr1 112152013 112154864 +
2 domain predictions
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LotjaGi2g1v0388900.1
n.a. Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|I1LHT8|I1LHT8_SOYBN Laccase; Found in the gene: LotjaGi2g1v0388900 LjG1.1_chr2 88493197 88497286 -
2 domain predictions
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LotjaGi2g1v0389000.1
n.a. Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|V7CFI0|V7CFI0_PHAVU Laccase; Found in the gene: LotjaGi2g1v0389000 LjG1.1_chr2 88499388 88502591 -
2 domain predictions
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LotjaGi3g1v0211300.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A1J7HEL7|A0A1J7HEL7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211300 LjG1.1_chr3 31647510 31652487 -
2 domain predictions
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LotjaGi3g1v0211300.2
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A0L9VT48|A0A0L9VT48_PHAAN Laccase; Found in the gene: LotjaGi3g1v0211300 LjG1.1_chr3 31648096 31651058 -
2 domain predictions
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LotjaGi3g1v0398000.1
n.a. Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A1J7GP42|A0A1J7GP42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0398000 LjG1.1_chr3 79996681 80002824 +
2 domain predictions
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LotjaGi3g1v0398000.2
n.a. Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A072TM83|A0A072TM83_MEDTR Laccase; Found in the gene: LotjaGi3g1v0398000 LjG1.1_chr3 79996777 80005094 +
2 domain predictions
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LotjaGi3g1v0489900.1
n.a. Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|G7JUW8|G7JUW8_MEDTR Laccase; Found in the gene: LotjaGi3g1v0489900 LjG1.1_chr3 90801789 90805414 -
2 domain predictions
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LotjaGi3g1v0489900.2
n.a. Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|I1LQN6|I1LQN6_SOYBN Laccase; Found in the gene: LotjaGi3g1v0489900 LjG1.1_chr3 90802091 90805341 -
2 domain predictions
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LotjaGi4g1v0400500.1
n.a. L-ascorbate oxidase; TAIR: AT4G39830.1 Cupredoxin superfamily protein; Swiss-Prot: sp|P24792|ASO_CUCMA L-ascorbate oxidase; TrEMBL-Plants: tr|A0A0B2S1B6|A0A0B2S1B6_GLYSO L-ascorbate oxidase; Found in the gene: LotjaGi4g1v0400500 LjG1.1_chr4 77786613 77790178 +
2 domain predictions
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LotjaGi4g1v0462700.1
n.a. Laccase; TAIR: AT1G18140.1 laccase 1; Swiss-Prot: sp|Q9LMS3|LAC1_ARATH Laccase-1; TrEMBL-Plants: tr|M5WFA5|M5WFA5_PRUPE Laccase; Found in the gene: LotjaGi4g1v0462700 LjG1.1_chr4 83303884 83307986 -
2 domain predictions
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LotjaGi5g1v0283600.1
n.a. Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283600 LjG1.1_chr5 60032525 60035721 -
2 domain predictions
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LotjaGi5g1v0283700.1
n.a. Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283700 LjG1.1_chr5 60041611 60043741 -
2 domain predictions
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LotjaGi5g1v0283800.1
n.a. Laccase; TAIR: AT5G48100.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|Q84J37|LAC15_ARATH Laccase-15; TrEMBL-Plants: tr|G7J6C9|G7J6C9_MEDTR Laccase; Found in the gene: LotjaGi5g1v0283800 LjG1.1_chr5 60049945 60053273 +
2 domain predictions
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