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IPR033138 is a Multicopper oxidases, conserved site.
<p>Multicopper oxidases [[cite:PUB00001382], [cite:PUB00001602]] are enzymes that possess three spectroscopically different copper centres. These centres are called: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear). The enzymes that belong to this family include:</p> <ul> <li>Laccase (EC 1.10.3.2) (urishiol oxidase), an enzyme found in fungi and plants, which oxidizes many different types of phenols and diamines.</li> <li>L-ascorbate oxidase (EC 1.10.3.3), a higher plant enzyme.</li> <li>Ceruloplasmin (EC 1.16.3.1) (ferroxidase), a protein found in the serum of mammals and birds, which oxidizes a great variety of inorganic and organic substances. Structurally ceruloplasmin exhibits internal sequence homology, and seem to have evolved from the triplication of a copper-binding domain similar to that found in laccase and ascorbate oxidase.</li> </ul> <p>In addition to the above enzymes there are a number of proteins which, on the basis of sequence similarities, can be said to belong to this family. These proteins are:</p> <ul> <li>Copper resistance protein A (copA) from a plasmid in Pseudomonas syringae. This protein seems to be involved in the resistance of the microbial host to copper.</li> <li>Blood coagulation factor V (Fa V).</li> <li>Blood coagulation factor VIII (Fa VIII).</li> <li>Yeast FET3 [[cite:PUB00000901]], which is required for ferrous iron uptake.</li> <li>Yeast hypothetical protein YFL041w and SpAC1F7.08, the fission yeast homologue.</li> </ul> <p>Factors V and VIII act as cofactors in blood coagulation and are structurally similar [[cite:PUB00000062]]. Their sequence consists of a triplicated A domain, a B domain and a duplicated C domain; in the following order: A-A-B-A-C-C. The A-type domain is related to the multicopper oxidases.</p> <p>This entry is drawn from a conserved region, which in ascorbate oxidase, laccase, in the third domain of ceruloplasmin, and in copA, contains five residues that are known to be involved in the binding of copper centres. However, it does not make any assumption on the presence of copper-binding residues and thus can detect domains that have lost the ability to bind copper (such as those in Fa V and Fa VIII).</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| | 14 | ||
– | PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| | 11 | ||
– | PREDICTED: laccase-5-like [Glycine max] gi|356540011|ref|XP_003538485.1| | 28 | ||
– | PREDICTED: laccase-8-like [Cicer arietinum] gi|502103902|ref|XP_004492390.1| | 28 | ||
– | PREDICTED: laccase-4-like [Glycine max] gi|356506772|ref|XP_003522150.1| | 26 | ||
– | PREDICTED: laccase-17-like [Cicer arietinum] gi|502103605|ref|XP_004492322.1| | 12 | ||
– | PREDICTED: laccase-17-like [Glycine max] gi|356527433|ref|XP_003532315.1| | 27 | ||
– | PREDICTED: laccase-17-like [Cicer arietinum] gi|502103605|ref|XP_004492322.1| | 26 | ||
– | Laccase [Medicago truncatula] gi|357492551|ref|XP_003616564.1| | 27 | ||
– | 20 | |||
– | PREDICTED: laccase-11-like [Glycine max] gi|356496745|ref|XP_003517226.1| | 28 | ||
– | PREDICTED: laccase-11-like [Glycine max] gi|356495402|ref|XP_003516567.1| | 28 | ||
– | Ascorbate oxidase [Lotus japonicus] gi|400001046|gb|AFP65861.1| | 16 | ||
– | PREDICTED: laccase-5-like [Glycine max] gi|356551363|ref|XP_003544045.1| | 28 | ||
– | PREDICTED: laccase-6-like [Glycine max] gi|356522496|ref|XP_003529882.1| | 26 | ||
– | PREDICTED: laccase-4-like [Glycine max] gi|356498932|ref|XP_003518300.1| | 26 | ||
– | PREDICTED: L-ascorbate oxidase-like [Cicer arietinum] gi|502140076|ref|XP_004504046.1| | 24 | ||
– | PREDICTED: laccase-1-like [Fragaria vesca subsp]. vesca] gi|470130735|ref|XP_004301258.1| | 15 | ||
– | PREDICTED: LOW QUALITY PROTEIN: laccase-14-like [Vitis vinifera] gi|359495131|ref|XP_003634921.1| | 11 | ||
– | PREDICTED: laccase-14 [Vitis vinifera] gi|359495139|ref|XP_002264394.2| | 26 | ||
– | PREDICTED: laccase-14-like [Solanum lycopersicum] gi|460384303|ref|XP_004237852.1| | 14 | ||
– | PREDICTED: laccase-4-like [Glycine max] gi|356566153|ref|XP_003551299.1| | 26 | ||
– | PREDICTED: L-ascorbate oxidase [Glycine max] gi|356575058|ref|XP_003555659.1| | 24 | ||
– | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|A0A0S3RKD8|A0A0S3RKD8_PHAAN Laccase; Found in the gene: LotjaGi1g1v0073600 | 31 | ||
– | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|V7B764|V7B764_PHAVU Laccase; Found in the gene: LotjaGi1g1v0073600 | 15 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 | 30 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 | 24 | ||
– | Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|I1JHH8|I1JHH8_SOYBN Laccase; Found in the gene: LotjaGi1g1v0114400 | 29 | ||
– | Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|G7JZP3|G7JZP3_MEDTR Laccase; Found in the gene: LotjaGi1g1v0114400 | 21 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1JHB0|I1JHB0_SOYBN Laccase; Found in the gene: LotjaGi1g1v0123400 | 29 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|G7KE42|G7KE42_MEDTR Laccase; Found in the gene: LotjaGi1g1v0123400 | 23 | ||
– | L-ascorbate oxidase; TAIR: AT5G21105.1 Plant L-ascorbate oxidase; Swiss-Prot: sp|P14133|ASO_CUCSA L-ascorbate oxidase; TrEMBL-Plants: tr|J7GBJ3|J7GBJ3_LOTJA Ascorbate oxidase; Found in the gene: LotjaGi1g1v0133700 | 17 | ||
– | Laccase; TAIR: AT5G01040.1 laccase 8; Swiss-Prot: sp|Q9LFD2|LAC8_ARATH Laccase-8; TrEMBL-Plants: tr|A0A072U0V9|A0A072U0V9_MEDTR Laccase; Found in the gene: LotjaGi1g1v0218900 | 29 | ||
– | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0579400 | 29 | ||
– | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A151QZC4|A0A151QZC4_CAJCA Laccase-17; Found in the gene: LotjaGi1g1v0582000 | 19 | ||
– | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|I1KZE6|I1KZE6_SOYBN Laccase; Found in the gene: LotjaGi1g1v0582000 | 30 | ||
– | Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0582200 | 29 | ||
– | Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|I1LHT8|I1LHT8_SOYBN Laccase; Found in the gene: LotjaGi2g1v0388900 | 31 | ||
– | Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|V7CFI0|V7CFI0_PHAVU Laccase; Found in the gene: LotjaGi2g1v0389000 | 31 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A1J7HEL7|A0A1J7HEL7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211300 | 29 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A0L9VT48|A0A0L9VT48_PHAAN Laccase; Found in the gene: LotjaGi3g1v0211300 | 13 | ||
– | Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A1J7GP42|A0A1J7GP42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0398000 | 19 | ||
– | Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A072TM83|A0A072TM83_MEDTR Laccase; Found in the gene: LotjaGi3g1v0398000 | 29 | ||
– | Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|G7JUW8|G7JUW8_MEDTR Laccase; Found in the gene: LotjaGi3g1v0489900 | 30 | ||
– | Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|I1LQN6|I1LQN6_SOYBN Laccase; Found in the gene: LotjaGi3g1v0489900 | 23 | ||
– | L-ascorbate oxidase; TAIR: AT4G39830.1 Cupredoxin superfamily protein; Swiss-Prot: sp|P24792|ASO_CUCMA L-ascorbate oxidase; TrEMBL-Plants: tr|A0A0B2S1B6|A0A0B2S1B6_GLYSO L-ascorbate oxidase; Found in the gene: LotjaGi4g1v0400500 | 27 | ||
– | Laccase; TAIR: AT1G18140.1 laccase 1; Swiss-Prot: sp|Q9LMS3|LAC1_ARATH Laccase-1; TrEMBL-Plants: tr|M5WFA5|M5WFA5_PRUPE Laccase; Found in the gene: LotjaGi4g1v0462700 | 32 | ||
– | Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283600 | 29 | ||
– | Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283700 | 15 | ||
– | Laccase; TAIR: AT5G48100.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|Q84J37|LAC15_ARATH Laccase-15; TrEMBL-Plants: tr|G7J6C9|G7J6C9_MEDTR Laccase; Found in the gene: LotjaGi5g1v0283800 | 30 | ||
– | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 | 30 | ||
– | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 | 21 | ||
– | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 | 21 | ||
– | Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 | 29 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 29 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
– | Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 | 23 | ||
– | L-ascorbate oxidase; TAIR: AT5G21105.1 Plant L-ascorbate oxidase; Swiss-Prot: sp|Q40588|ASO_TOBAC L-ascorbate oxidase; TrEMBL-Plants: tr|A0A0B2RL59|A0A0B2RL59_GLYSO L-ascorbate oxidase; Found in the gene: LotjaGi6g1v0191100 | 27 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd13893 | CDD | 1 | 1.69 |