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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033308
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.676s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2532300.1
n.a. Serine/threonine phosphatase-like protein [Medicago truncatula] gi|357514393|ref|XP_003627485.1| chr3 31108794 31114812 +
2 domain predictions
1 GO term
Lj3g3v2613500.1
n.a. Metallophosphoesterase [Medicago truncatula] gi|357513939|ref|XP_003627258.1| chr3 32199664 32202613 -
2 domain predictions
1 GO term
Lj3g3v2613500.2
n.a. PREDICTED: metallophosphoesterase 1-like [Fragaria vesca subsp]. vesca] gi|470127340|ref|XP_004299630.1| chr3 32199664 32202613 -
2 domain predictions
1 GO term
LotjaGi3g1v0406400.1
n.a. Serine/threonine-protein phosphatase; TAIR: AT1G53710.1 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|Q9UUH0|YKIC_SCHPO Uncharacterized protein C630.12; TrEMBL-Plants: tr|A0A0B2NWF3|A0A0B2NWF3_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0406400 LjG1.1_chr3 80972212 80979286 +
2 domain predictions
1 GO term
LotjaGi3g1v0415700.1
n.a. Calcineurin-like metallo-phosphoesterase superfamily protein, putative isoform 1; TAIR: AT1G53710.2 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|Q566Y9|MPPE1_DANRE Metallophosphoesterase 1; TrEMBL-Plants: tr|A0A1J7GWH2|A0A1J7GWH2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0415700 LjG1.1_chr3 82129432 82132727 -
2 domain predictions
1 GO term