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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0406400 |
| Transcript ID | LotjaGi3g1v0406400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G53710.1 Calcineurin-like metallo-phosphoesterase superfamily protein; Swiss-Prot: sp|Q9UUH0|YKIC_SCHPO Uncharacterized protein C630.12; TrEMBL-Plants: tr|A0A0B2NWF3|A0A0B2NWF3_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0406400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80972212..80979286) extracted from Lotus japonicus Gifu genome v1.2.
CATGACAATTATTTACACCATCAGTGCATCAAAATTAAAACGTAAACAATAAAATAAGGAAAAACTCACAAAGTGATTAT TATTACTTATTTCACTAATTACATGATTTACAGTAGTGCTAATAATATCAGAATTACTTTGGGGGAGAAAGAGAAACAGT GTAGTTACTAGTTGCACCGTGATGATTCAATCTCAAGCATTGAGCTGATTCGATTGAAGGAGGATCAGTGATGAAGCAGC GAGAGTTGACTGTGTTGCTATGCCTCATTTGGGCACTCACCCTCCTCTACGGGGAGATGTTCGCTTACTGGCTTCCATCC CTCTTCACCTGTTCCTGGCCCCATCTTCTCCGCACCACCACCACCACCACCACCCCTTCTTCTTCTTCAACGGTAACCAT AAATAAAGTCTTCAACTTTTCACTCCCTTCATTTTTGGGTCGCACTCAGTTTTTTTTATTGTTTACAGTTCATATCCAAA ACCAGAACTTTATAATTTTTGTTGGATTTTGTTTATGGGATGGGAAGTAGGTAAACAATTAAGCTGTAGCTGAAAAAATA GTTTTTTTTTTGCAAAATTAATAAATAGATTCAAATATTAGTTTTTGGTGTGTAATGTAATGATTCTAACAAGGAATGTG AGGGTGAATTTATGCTGGATCTATACATTTTCTAAATGGAGTTTTGTGGAATGTTGAAGAGTTTGATGATTCATAATCCT GGCTGTTGAAGCTATAAAGGTGAACCTAAGTCAACATGGTTGCTTCCTATCTAGGACACTACACAATGTGTAATTGTGTA CACATTACAATTTTATGCTGTAAACATTTGTGAAATGCATAGCTGAATAACCTGATTGCAGGTTCAAACAGACAGTGGGA ATCATCAAGCTCGTTATGTAAAAGTTGCTGTTATTGCAGATCCACAGGTTAACTTTTGTACTACTACAATTATGGGTATA CATGTATTCAAGAGAAATCTACTTGCATTGCATATTTAGGCACATCTATTAATGTATGTTTTTGTGGATGTGCATCTCTC TTCTGATATGCCCTTTTGTTTTTTTTAACATGACAGCTCATGGATAAAACTTCTCTCCGTCTTCCTGAAAAATCGCTTGC ACTGGAGATTGCAGAATTCTACACTGATTTAAACATGCGCCGATCATTCTTTGCATCTATCCTGCCTTTCAAACCTGATG TCATATTATTTTTAGGTGATTACTTTGATGGAGGTCCTTATTTATCGGATGAAGAGTAAGTATCTATTTGTTAATTTGGC TTTTTGCAAGTTTATAGTAAATGAGCATGGCAATTAACTCCAAACCATGTAAACGAATGTGGCGAGAAACTCTGAACCAT GTAAGTGAACGTGGCAAACAACTCTGCCTCCTAATCATGACCCAATCCAGCCCATCTGATTCACAACATCGATATGGATC ATAGTCACTGCATAGACCGCTATCACTAACATAAAGTGAACATCCTGGACGCTCATAACCACCACTCCATCGTGTTCTTC TTCAAAAATACCTCCATTTTGAGGCCTCCTCTCGAGGAACATGATCCTCTTGAGTAACGTCAGCTTGTGGCTTAGGATCA TGTTCCTCAAGAGGATGACATTCCTCGAGGGGGAGACATTCTTGAAGAGGGCCACCATAGGGTGGTGATAAGCGGGTCCA AGAATATTTGATTTATGTTGTTGATGGCGGCTTAAGTAGCGGCTATGTTCCATGTTTGCCATTGTGAATCCTCGCAAATG AACTGCATGAGTCATAATTAGGTGGCAGAGCACATTCGCAAATACATATATGTGCTTTGTAATACCGATGTTTTCACAAT TTGTCTGGGGCTTAATGTTAAATTTTAATCCTTCTTTTTTGTTTTTCTGAGTCCTATATTTCAATTGGTTATTTAATCAT TAATTTACATAATTAGCTCAGATATCCAAATTGTTGAAAACATGAAAAAAAAGTAACGCTTAGATTCTGTAGTCAACTTG TTCTAAATGATTATATGCTAAAGGGAAGCCCCTAACTAATGCAAGTAAAATGTGATTTGACTTATGCATCTTGAAATATT TGTTTTCTGTGGTTGAATTATGTATCCATAGCAAGTTCACTCAAATCCTAACATGAAATTCTTTTATGATCTTTTGGATG GATAGATGGCAGGAGTCTTTCAATCGCTTCAAACATATCTTTGGTTTGAATGCACAAGGAAAATACACAGACAAGCAAGT TTACTACATTCCTGGAAATCATGATATTGGTTATGAAAGTCTTCATTCTCAAAAGCCAGAGGTATTTCAACATATTACTG CTCATGTTTTCATACCCAAGTCCTGGGAGTCAAAGACGAACACATGACTAATAATGTTGCCAGTTACATTGGAATTGGAG TCATGCCTATATTCAAGACATTAGGGATGAGAATTTGCATTTATTTTTCTTAAGTGTTGTTGATTTAAAATTTTGGACTA ATCAATGATATATAAAAATTGCTAATGGATGAAACTTTGTATAGACAAATCTCCTTTACGTTAGGGTGTATTTCCAAGTT TTTAGGGGAGGGGACGAGAAGGCTTTGAGGGGAAGGGGAGGGCATGGGAAGGAGGGAGAAGGAGGGGAAGCCCTTCCCTT GTTTGTGAGTCCAAAACCCCCAATTTGGGAGAACTAGAAAATATGACAAAGAGAGGGTTTTGGATCGGTGTTGGAGGGTT TCTTGAAATACCCCAAAGCCTTCCCCCCTTTTTAAAATCTCCCAAACCAGGGGAGGCCTTCTCATGAGCTTCCCCTTTCC CTTCCCTTCCCTTCCCTCCCCTCCAAAGCCCAACTCACAAACACACCCTTAATGTATAACTGATTTTGTCTGAAGATGAA AGTACGTTAAACATGGCAGACCTTTAATAGCAACAATAAAAGGCCTTCATCTTATGATGGTTGTCTGATGATTTGATTTT GATAACTCCTGTAAAATGACACTTGGCACTAAAATATTTCAGATATCTGTCTGTTTAATTGTGATTTACCTTAAACGAGC TTTTGAGTCCCATCTTAACTTTATAAAAATGCTCTGTCAAGAGTTTCGATGCTCAAGATTTTCATTTCAGTTTTACATAT TGTAGCATATCTATCATATTTATGCTCTCTGTTAACTGTATAATCTCCTTTGGTGGGTTCTTGACCCAACATTTTTATCA TTGCGTGAGCATAGGTTATCCGACGCTATGAGGCAGCATTTGGAACTAGGAACTACATATTTACTGTTGGAAAAGTGGAT TTTGTTGCTGTTGATGCTCAAACTCTGGATGGTAAACTGGGTTTTGCTTTATAGATATGAGTAGTCAAGTTTCTTAATTA ACAATATTGTAATTGGTAGTAATCTTATTTTGTGGTATCAATCTGTTACTATTGATTTACCTGTCAATACATTATGTGTC CCTGTCTTATCTGACATCAAGTTTTTTTTTAATCTCTTTCTATCTGTCTCTCAGCTGTGCCTTTTCCAATATATGGTTCT TTTACTTTTTTCCGCCTCATCCAATTTACCAAGTTTCATGTGGAACTTATTACTTCTTTGTCCTGCCTTTAACGATGATT TTTTCTTCATTTGGATGAGGTTTTCTTTATGGTCTATTTCTTGCTTTGTTTGACAGAATATTCATTGTGACACTAGCAAT ATACTTTAACCATTTAAATTACTATAATTTTTTATATAGCTGATATATTGTAAATTTCAATCTCATGCCATTTATACAAG TCACTGCTTGCAGAATTTTGAAAAAACTTAAATTACTTAACTCATTATGTTTTCTACAGGAAATCCACAAAAGCACCTGA CTTCTCAAACTTGGGAGTTTGTGAAGAATATATCTAGCGGTATAAACTGGACTATACATACATTATTTTTAGTTTTTATC TTGTGTCCTATCGTAATCCACAATTCTTTTTTATTTTCTAGATGATGTAGTTCATCCAAGAGTCTTGTTGACACATATTC CTTTATATCGACGTGATGATACTTACTGTGGCCCTGATCGCAGTTCCCCAATTATCAATCAGGTAAAATTTATTTCAGTT TCTTGAAGCGCATCTGTGGTAGGCATCTTATATTTTGAATGACATTGGCGCTCACAGTAGTTGGCCCTCACAGTAGTGTG GTGCAGTGCGTGATTTCTGAAATGAGTAGTTCTTACCTGGCATTCTTGAAACTACTAATATTCTTTCTTTCTTTAATCTT CAGAAGATGCATCGCGCTGTGCATGGCAATACTAATAATATATTGTAAGTTAGTCTATCTTACGAGAAGCTTGAAGATTT TATGGACTGTATATAATATGGCTCATAGATACTGAGGCTTGGTTTAACTTTCAGATATCAAAATTATGTTTCTAAGGAGT CATCCAAGTATTTACTGGATACAATCAAGCCTGTGAGTCATCTCATCTATCTTCTCTTTGATTTTTTTTTTGGCATGACT AATCCACCCTAATATGGATGTGGGGGAAAAAATTAATCCATGATGGATTTGTCAACAATTTGTTTATGTTTCATGTGTAT AGTATGCTATTCACTTTATGTCTTCTATTTTTAAAAGACTTTGTGATGTAGTAATAAAAATACTTGGGGTCATATTCATT AAGTCTCTTTTTTCAAAAAAAATAAATGTCATGAAGTCTCTACCATGATTACTAGAAATTAGATCATAACTCAGAAAGGA GGGAAGCTCAAAGAGGAGAGATAGTGAAGATTAAAACTTTCTGACTAGGTAGTTTTGGTTTTGGCAGAAGTTTATTTTCT CTGGCCATGATCATGACCAGTGCACTATCACTCATCAATATGAATTTGGGCCTGCAAACGAGGTAAGAAACCTGATCTTC TTATCTGGGCCTTCTCATTTAGTGTTGGGACACTTAGACTGACAGTAGTATGCAGCACACTCTAGGTACTATAAGCTGGC AACAAGGAAATTTGTATCCTTCTTTCATGCTGTTATCAGTTGACAACTCACCTCGCCCAAATGCTTCCATTCCAGAAGAG GTTTTGTTGACTCATCTTTGTTACCTGCCAATGCAAACACACATTTATATATGGTAGCTATGAATGCTGGTGTTGATTTC GATATAAAATTTTCACCCGAGCCTTCCTGTCAACTTTTTTTTTAATGAGTTCTATTTTGCTCTAATTTTCAGGTATGCTG TGCAATTTGTTCTCACCCTTCTTGCCTTACTACTATGGCCAACAAGTAGCACAAGTTTTTGGCATCAGTGTTGGAGCTTG GCGAGCCATTTTAAACAACTAATAGCTTGCATCGTGTCAAGAAGCGATACAAAAGAGAAGGATGAGGATGCAAATTATGA ATATGAGATGATGTGGGATGCAGATGGATCAATGCATCTTATAAAAAAACCCTTGAATGCGTCGATTGTAAATTCAAATG AACTGAGCTCAGGAGAAAGGTAAACTTTGGTATTCATGTTCCTGTTATTACTCTTTACATGGAAAAGTATTTGGCATTTC ACCCTGTAGAAGCGTTATCGCTTGGTCTGTAATGAAACATAAAAATTGAGCATCCCCAACTCTGTTAGTCTGTTACACAT TGTAGACATAAAACTTTAGCATCTTCCTTTATGTTGCTGCCAGGGGTAATATGGTGATGCGGCCAAGTGCTAGAAAAAAT ACAGCTCAGGAAGCAGATGTCTCTGTGAATGTGGATATGGGATCAAGCACTGGGCTTGATCCTGTTGCAAGAATACTTCC TAGAACAGGAAAATCAAGGACAACATTTATTATCCAAAGATTGTTACGCACACTGCGAATGCTGACAGTTATTGCTGCGG TGAATGTTCCTCTTTACATGATGCTGCTATTCAAGGATTGGATTGACAAATAAAGACTTCCTATTGGAGTGATATATCAT TCAGGTTTTACATTCTGTTTTTCATTTTTTAATGAAGATTCGTAGATCCAGTTAGATAGAGCAAATAGTTAATCATGTCT TGATGCTTGTGAATGTTAACTGGGTGGCTTGTAACATATCTCAATTATTCATGGTAGGGCCATGATCATTTGCAACATCA CCTGTAATAGATGGTTTTGTAACATTATTTTTCTGTACTGCTGTGGAGAACTTGAGGTTTCTTTAACTTCATTTTTGCTT AAAGTTTACCCAACACATCAATGTCATTTGATTTAAAATGCCTTTTCTCATAACGTTTATTTAGTTTTTAATACTGTCTT GTCCTTTATGTCTGACATTTACACTTTTGCCCCCCAAAAAAGTAACATTTACACTAAAAATGAATCAACAACTATATTAG TACATTAGCTATCTGTCATAAAATAATGTTATAAAAAGGAGATCTGGATGCATATACAACAGTTTTAAATAAGGCTGAAG TAAGTTTGTGGCATGGTCTGTTTTTTAAACAACTTTCTCTCTTCCTAAGTTTCCTTAGGTGTCTTTGTCTTACCAGGAAT TATATGGATTGAATTGCCTTAGGTGTCTTCATGTTAAGTCATATAGCAATCTCATGATTGCATGTGTTGAATTTAAGCTT CCTTAATTCGGAGCTAGGGTTATTCGGTTTCCAGTAAATTGAAGGGTGAAGAGGGTGAGCCTATGCTTTGTCTCTGCTTA TATTAAGGCAAATTATATTTATTCTTACTTAATTTTTATTTTGGCATCGTAAATAGTAAATTGGTCTATAATATCCCATA AATTTTGGTTTTTGATCGAGCGTAATAGCGTCAAGTGATCCATGATGGCGCCGGGTGCCGGGTGATCCGTATAGCCTAGC TCTTAGTGGAGTAAGGTTTTTGTTTTTGTTGTTGTTGTTTATACTAAATTGCTTATTATACTTGTTTGGTTGGATAAGAA TTGTGGAAATTGTTTAATAGATAGCATATTTTCTGTATCAATCCCGTGGGAACAAGAAAGCTTTATAAAATGTTCACTGA AACTTCTGCAATTATCAACCCAGGTGAGGTACAACCTCGTCTAAAGTGACTTCTCACTTTATCGAGTGAAGTACTGAATG AAAAATGAAAATCTCAATATCAGAGTTTGTTTTAG
CDS sequence (LotjaGi3g1v0406400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCAGCGAGAGTTGACTGTGTTGCTATGCCTCATTTGGGCACTCACCCTCCTCTACGGGGAGATGTTCGCTTACTG GCTTCCATCCCTCTTCACCTGTTCCTGGCCCCATCTTCTCCGCACCACCACCACCACCACCACCCCTTCTTCTTCTTCAA CGGTTCAAACAGACAGTGGGAATCATCAAGCTCGTTATGTAAAAGTTGCTGTTATTGCAGATCCACAGCTCATGGATAAA ACTTCTCTCCGTCTTCCTGAAAAATCGCTTGCACTGGAGATTGCAGAATTCTACACTGATTTAAACATGCGCCGATCATT CTTTGCATCTATCCTGCCTTTCAAACCTGATGTCATATTATTTTTAGGTGATTACTTTGATGGAGGTCCTTATTTATCGG ATGAAGAATGGCAGGAGTCTTTCAATCGCTTCAAACATATCTTTGGTTTGAATGCACAAGGAAAATACACAGACAAGCAA GTTTACTACATTCCTGGAAATCATGATATTGGTTATGAAAGTCTTCATTCTCAAAAGCCAGAGGTTATCCGACGCTATGA GGCAGCATTTGGAACTAGGAACTACATATTTACTGTTGGAAAAGTGGATTTTGTTGCTGTTGATGCTCAAACTCTGGATG GAAATCCACAAAAGCACCTGACTTCTCAAACTTGGGAGTTTGTGAAGAATATATCTAGCGATGATGTAGTTCATCCAAGA GTCTTGTTGACACATATTCCTTTATATCGACGTGATGATACTTACTGTGGCCCTGATCGCAGTTCCCCAATTATCAATCA GAAGATGCATCGCGCTGTGCATGGCAATACTAATAATATATTATATCAAAATTATGTTTCTAAGGAGTCATCCAAGTATT TACTGGATACAATCAAGCCTAAGTTTATTTTCTCTGGCCATGATCATGACCAGTGCACTATCACTCATCAATATGAATTT GGGCCTGCAAACGAGCACACTCTAGGTACTATAAGCTGGCAACAAGGAAATTTGTATCCTTCTTTCATGCTGTTATCAGT TGACAACTCACCTCGCCCAAATGCTTCCATTCCAGAAGAGGTTTTGTTGACTCATCTTTGTTACCTGCCAATGCAAACAC ACATTTATATATGGTATGCTGTGCAATTTGTTCTCACCCTTCTTGCCTTACTACTATGGCCAACAAGTAGCACAAGTTTT TGGCATCAGTGTTGGAGCTTGGCGAGCCATTTTAAACAACTAATAGCTTGCATCGTGTCAAGAAGCGATACAAAAGAGAA GGATGAGGATGCAAATTATGAATATGAGATGATGTGGGATGCAGATGGATCAATGCATCTTATAAAAAAACCCTTGAATG CGTCGATTGTAAATTCAAATGAACTGAGCTCAGGAGAAAGGGGTAATATGGTGATGCGGCCAAGTGCTAGAAAAAATACA GCTCAGGAAGCAGATGTCTCTGTGAATGTGGATATGGGATCAAGCACTGGGCTTGATCCTGTTGCAAGAATACTTCCTAG AACAGGAAAATCAAGGACAACATTTATTATCCAAAGATTGTTACGCACACTGCGAATGCTGACAGTTATTGCTGCGGTGA ATGTTCCTCTTTACATGATGCTGCTATTCAAGGATTGGATTGACAAATAA
Protein sequence (LotjaGi3g1v0406400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKQRELTVLLCLIWALTLLYGEMFAYWLPSLFTCSWPHLLRTTTTTTTPSSSSTVQTDSGNHQARYVKVAVIADPQLMDK TSLRLPEKSLALEIAEFYTDLNMRRSFFASILPFKPDVILFLGDYFDGGPYLSDEEWQESFNRFKHIFGLNAQGKYTDKQ VYYIPGNHDIGYESLHSQKPEVIRRYEAAFGTRNYIFTVGKVDFVAVDAQTLDGNPQKHLTSQTWEFVKNISSDDVVHPR VLLTHIPLYRRDDTYCGPDRSSPIINQKMHRAVHGNTNNILYQNYVSKESSKYLLDTIKPKFIFSGHDHDQCTITHQYEF GPANEHTLGTISWQQGNLYPSFMLLSVDNSPRPNASIPEEVLLTHLCYLPMQTHIYIWYAVQFVLTLLALLLWPTSSTSF WHQCWSLASHFKQLIACIVSRSDTKEKDEDANYEYEMMWDADGSMHLIKKPLNASIVNSNELSSGERGNMVMRPSARKNT AQEADVSVNVDMGSSTGLDPVARILPRTGKSRTTFIIQRLLRTLRMLTVIAAVNVPLYMMLLFKDWIDK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 4 | 549 | 546 | 2.3E-209 | – | |
| PANTHER | 4 | 549 | 546 | 2.3E-209 | ||
| Phobius | 6 | 16 | 11 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 374 | 353 | - | – | |
| SUPERFAMILY | 67 | 349 | 283 | 4.86E-31 | – | |
| Pfam | 68 | 310 | 243 | 2.6E-18 | ||
| CDD | 70 | 336 | 267 | 2.32976E-63 | – | |
| Phobius | 375 | 393 | 19 | - | – | |
| TMHMM | 375 | 394 | 20 | - | – | |
| Phobius | 394 | 523 | 130 | - | – | |
| TMHMM | 521 | 543 | 23 | - | – | |
| Phobius | 524 | 543 | 20 | - | – | |
| Phobius | 544 | 549 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0406400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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