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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033917
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.822s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0190389.1
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Glycine max] gi|356542064|ref|XP_003539491.1| chr0 93059246 93061329 -
2 domain predictions
1 GO term
Lj3g3v1295720.1
n.a. PREDICTED: phosphatidylglycerol/phosphatidylinositol transfer protein-like [Glycine max] gi|356542064|ref|XP_003539491.1| chr3 16567074 16569157 +
2 domain predictions
1 GO term
LotjaGi3g1v0184400.1
n.a. Phosphatidylglycerol/phosphatidylinositol transfer protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|C6TFA8|C6TFA8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0184400 LjG1.1_chr3 25811045 25814213 +
2 domain predictions
1 GO term
LotjaGi3g1v0470600.1
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G44100.1 MD-2-related lipid recognition domain-containing protein; Swiss-Prot: sp|D4AYQ6|NPC2_ARTBC Phosphatidylglycerol/phosphatidylinositol transfer protein; TrEMBL-Plants: tr|I3SA64|I3SA64_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0470600 LjG1.1_chr3 88612231 88617500 -
2 domain predictions
1 GO term
LotjaGi5g1v0107000.1
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3T0S6|I3T0S6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0107000 LjG1.1_chr5 20262269 20267087 +
2 domain predictions
1 GO term
LotjaGi5g1v0107000.2
n.a. MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; TAIR: AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein; Swiss-Prot: sp|Q54SW1|Y2179_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179; TrEMBL-Plants: tr|I3SG86|I3SG86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0107000 LjG1.1_chr5 20264226 20266647 +
2 domain predictions
1 GO term