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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034086
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.829s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0185500.1
n.a. Pectin methylesterase inhibitor; TAIR: AT1G48020.1 pectin methylesterase inhibitor 1; Swiss-Prot: sp|Q9LNF2|PMEI1_ARATH Pectinesterase inhibitor 1; TrEMBL-Plants: tr|A0A151R4S4|A0A151R4S4_CAJCA Pectinesterase inhibitor; Found in the gene: LotjaGi2g1v0185500 LjG1.1_chr2 61202812 61203418 +
2 domain predictions
2 GO terms
LotjaGi2g1v0185700.1
n.a. Pectin methylesterase inhibitor; TAIR: AT1G48020.1 pectin methylesterase inhibitor 1; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A0A151SPC0|A0A151SPC0_CAJCA Pectinesterase inhibitor 1; Found in the gene: LotjaGi2g1v0185700 LjG1.1_chr2 61260517 61261132 +
2 domain predictions
2 GO terms
LotjaGi3g1v0033100.1
n.a. Pectin methylesterase inhibitor; TAIR: AT1G48020.1 pectin methylesterase inhibitor 1; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A0A151SPC0|A0A151SPC0_CAJCA Pectinesterase inhibitor 1; Found in the gene: LotjaGi3g1v0033100 LjG1.1_chr3 3501539 3502382 +
2 domain predictions
2 GO terms
LotjaGi3g1v0033300.1
n.a. Invertase/pectin methylesterase inhibitor family protein; TAIR: AT1G48020.1 pectin methylesterase inhibitor 1; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A0A151SPC0|A0A151SPC0_CAJCA Pectinesterase inhibitor 1; Found in the gene: LotjaGi3g1v0033300 LjG1.1_chr3 3521484 3522122 +
2 domain predictions
2 GO terms
LotjaGi3g1v0172400.1
n.a. Pectin methylesterase inhibitor; TAIR: AT3G17220.1 pectin methylesterase inhibitor 2; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A0A1J7HS69|A0A1J7HS69_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0172400 LjG1.1_chr3 23820687 23821540 +
2 domain predictions
2 GO terms
LotjaGi6g1v0023800.1
n.a. Invertase/pectin methylesterase inhibitor family protein; TAIR: AT1G48020.1 pectin methylesterase inhibitor 1; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A0A1J7HS69|A0A1J7HS69_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0023800 LjG1.1_chr6 4387889 4388540 +
2 domain predictions
2 GO terms
LotjaGi6g1v0279800.1
n.a. Pectinesterase inhibitor; TAIR: AT5G64620.1 cell wall / vacuolar inhibitor of fructosidase 2; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A9P9N2|A9P9N2_POPTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0279800 LjG1.1_chr6 59646635 59647426 -
2 domain predictions
2 GO terms