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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0023800 |
| Transcript ID | LotjaGi6g1v0023800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Invertase/pectin methylesterase inhibitor family protein; TAIR: AT1G48020.1 pectin methylesterase inhibitor 1; Swiss-Prot: sp|P83326|PMEI_ACTDE Pectinesterase inhibitor; TrEMBL-Plants: tr|A0A1J7HS69|A0A1J7HS69_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0023800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4387889..4388540) extracted from Lotus japonicus Gifu genome v1.2.
CATCATGCTAAACTAAGAGATTAAACCAAATAAAAATTTACAATGTCCTCTAAGTATTTCCCATCCCTCCTGCTACTGCT AGCGTTTCTATTGTTTGTTGCATCTTCCGGAGCAACCAAAGTAGTGGAAGTGGGTGAGATTTGCAAGAAATCCACAAACC CTTCATTTTGTTTGGCTGTTCTAAACTCCAACCCAGGTGGGAAAGATCTTATTAGCCTTGCTCAATACACAATTGACATA GATCGTGCCAACCTGACTAACACAATTACTCTAATCAAATCGTTGATTGCAAACAGTAGTGGCGATCCAAAGGCAAATGC CCATTACAAAAATTGCTTGTCATATTTTGTGGTCGATGGCGGTGCTTTTGGTGCCATTGAGGCCACTCAACAATATTTAA ACAAGAGAGATTATGTTGGTGTGAATATGCGTGCAACTGATGTCCACTACTTTGTTGATTATTGTATTTCAGGAGATGAT TCACCTGGCCCGAACCCACCTCCTTTTCCTGATACCTCGTTGCTTCCAAAATATGCTCAAGTTATTCAGGATATTACCGA AATTATTCTTATCATATCAAATTTATTGGAAGGAACTTGATCAGATGTTGTTCAATTTGGATAAAGTAGCAATAAAATGA GTTTTGATTTTA
CDS sequence (LotjaGi6g1v0023800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCTAAGTATTTCCCATCCCTCCTGCTACTGCTAGCGTTTCTATTGTTTGTTGCATCTTCCGGAGCAACCAAAGT AGTGGAAGTGGGTGAGATTTGCAAGAAATCCACAAACCCTTCATTTTGTTTGGCTGTTCTAAACTCCAACCCAGGTGGGA AAGATCTTATTAGCCTTGCTCAATACACAATTGACATAGATCGTGCCAACCTGACTAACACAATTACTCTAATCAAATCG TTGATTGCAAACAGTAGTGGCGATCCAAAGGCAAATGCCCATTACAAAAATTGCTTGTCATATTTTGTGGTCGATGGCGG TGCTTTTGGTGCCATTGAGGCCACTCAACAATATTTAAACAAGAGAGATTATGTTGGTGTGAATATGCGTGCAACTGATG TCCACTACTTTGTTGATTATTGTATTTCAGGAGATGATTCACCTGGCCCGAACCCACCTCCTTTTCCTGATACCTCGTTG CTTCCAAAATATGCTCAAGTTATTCAGGATATTACCGAAATTATTCTTATCATATCAAATTTATTGGAAGGAACTTGA
Protein sequence (LotjaGi6g1v0023800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSKYFPSLLLLLAFLLFVASSGATKVVEVGEICKKSTNPSFCLAVLNSNPGGKDLISLAQYTIDIDRANLTNTITLIKS LIANSSGDPKANAHYKNCLSYFVVDGGAFGAIEATQQYLNKRDYVGVNMRATDVHYFVDYCISGDDSPGPNPPPFPDTSL LPKYAQVIQDITEIILIISNLLEGT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| PANTHER | 6 | 184 | 179 | 2.6E-40 | – | |
| PANTHER | 6 | 184 | 179 | 2.6E-40 | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| TIGRFAM | 9 | 182 | 174 | 2.3E-16 | ||
| Phobius | 20 | 24 | 5 | - | – | |
| Gene3D | 24 | 184 | 161 | 4.5E-34 | ||
| Phobius | 25 | 185 | 161 | - | – | |
| SMART | 25 | 178 | 154 | 0.0017 | ||
| CDD | 26 | 182 | 157 | 1.16962E-32 | ||
| SUPERFAMILY | 30 | 182 | 153 | 1.83E-18 | ||
| Pfam | 31 | 144 | 114 | 2.4E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Biological process | Negative regulation of catalytic activity | Any process that stops or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase inhibitor activity | Stops, prevents or reduces the activity of any pectinesterase enzyme. |
Expression pattern of LotjaGi6g1v0023800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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