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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034772
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.442s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0143100.1
n.a. RNA-binding protein, putative; TAIR: AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B; TrEMBL-Plants: tr|I1KYJ6|I1KYJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0143100 LjG1.1_chr6 41286214 41292441 +
2 domain predictions
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LotjaGi6g1v0143100.2
n.a. RNA-binding protein, putative; TAIR: AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B; TrEMBL-Plants: tr|I1KYJ6|I1KYJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0143100 LjG1.1_chr6 41286214 41292872 +
2 domain predictions
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LotjaGi6g1v0143100.3
n.a. RNA-binding protein, putative; TAIR: AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B; TrEMBL-Plants: tr|I1KYJ6|I1KYJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0143100 LjG1.1_chr6 41286242 41304636 +
2 domain predictions
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LotjaGi6g1v0143100.4
n.a. RNA-binding protein, putative; TAIR: AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B; TrEMBL-Plants: tr|I1KYJ6|I1KYJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0143100 LjG1.1_chr6 41299357 41301420 +
2 domain predictions
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